BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV31333 (591 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 31 0.53 SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) 31 0.93 SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93 SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 31 0.93 SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 31 0.93 SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93 SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 31 0.93 SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4) 31 0.93 SB_20653| Best HMM Match : Sialidase (HMM E-Value=0.35) 31 0.93 SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3) 30 1.6 SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03) 30 1.6 SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1 SB_17989| Best HMM Match : PAN (HMM E-Value=0.00015) 29 2.1 SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_4891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 29 3.8 SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 5.0 SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0 SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0 SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6 SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 28 6.6 SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 28 6.6 SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6 SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1) 28 6.6 SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6 SB_41099| Best HMM Match : VWA (HMM E-Value=0) 27 8.7 SB_17015| Best HMM Match : 7tm_1 (HMM E-Value=0.00027) 27 8.7 SB_3288| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 >SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) Length = 1012 Score = 31.5 bits (68), Expect = 0.53 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 522 DPAVTRKFPVNNRFQQRRQGAPSGFTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 581 Query: 455 GYQ-PTGNAIPT 487 GYQ PT N +PT Sbjct: 582 GYQKPTTNQLPT 593 >SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) Length = 264 Score = 30.7 bits (66), Expect = 0.93 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195 Query: 455 GY-QPTGNAIPT 487 GY QPT N +PT Sbjct: 196 GYQQPTTNQLPT 207 >SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 625 Score = 30.7 bits (66), Expect = 0.93 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195 Query: 455 GY-QPTGNAIPT 487 GY QPT N +PT Sbjct: 196 GYQQPTTNQLPT 207 >SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) Length = 239 Score = 30.7 bits (66), Expect = 0.93 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195 Query: 455 GY-QPTGNAIPT 487 GY QPT N +PT Sbjct: 196 GYQQPTTNQLPT 207 >SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) Length = 346 Score = 30.7 bits (66), Expect = 0.93 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 249 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 308 Query: 455 GY-QPTGNAIPT 487 GY QPT N +PT Sbjct: 309 GYQQPTTNQLPT 320 >SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1317 Score = 30.7 bits (66), Expect = 0.93 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 546 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 605 Query: 455 GY-QPTGNAIPT 487 GY QPT N +PT Sbjct: 606 GYQQPTTNQLPT 617 >SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) Length = 239 Score = 30.7 bits (66), Expect = 0.93 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195 Query: 455 GY-QPTGNAIPT 487 GY QPT N +PT Sbjct: 196 GYQQPTTNQLPT 207 >SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4) Length = 335 Score = 30.7 bits (66), Expect = 0.93 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 232 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 291 Query: 455 GY-QPTGNAIPT 487 GY QPT N +PT Sbjct: 292 GYQQPTTNQLPT 303 >SB_20653| Best HMM Match : Sialidase (HMM E-Value=0.35) Length = 572 Score = 30.7 bits (66), Expect = 0.93 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +3 Query: 420 FPSASITSPTRTDTSPLVMLSPLPHQCLSRSLVLLPTSPRNI 545 +P + ITS +D S + S LP C + + PT+P +I Sbjct: 166 YPRSDITSMANSDVSSGAIYSSLPSVCPPKGTHMTPTAPASI 207 >SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3) Length = 336 Score = 29.9 bits (64), Expect = 1.6 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 392 SFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQ 508 SF+ S EG P + E+ Q G+ IPTSPPV E+ Sbjct: 67 SFASVSEEGSPAKKIHFERED--QDPGDQIPTSPPVAER 103 >SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03) Length = 1832 Score = 29.9 bits (64), Expect = 1.6 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +3 Query: 426 SASITSPTRT--DTSPLVMLSPLPHQCLSRSLVLLPTSPRNIPLK-K*AINLTD 578 S+S T PT T SP +SP P + S SL L P + +IP++ K N TD Sbjct: 780 SSSSTIPTSTALHRSPPAKVSPKPSRSASASLKLPPMADNSIPVELKKEENKTD 833 >SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1047 Score = 29.5 bits (63), Expect = 2.1 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = +2 Query: 275 PDGSYTYFYETNNGIAAQEQGVPRNLGGN--PPAVPVVAQGSFSWTSPEGVPISVNYVAD 448 P G Y + + G+ Q+ P ++ N PP +P+ A + P +P + Sbjct: 671 PQGIPYYGPQASGGVIFQQGPYPSHMPANAPPPNIPIQANFPRNIPPPNYIPPTQQMSFQ 730 Query: 449 ENGY-QPTGNAIPTSPPVPE 505 + Y +P N IPT V E Sbjct: 731 HSPYNRPPPNVIPTGNMVIE 750 >SB_17989| Best HMM Match : PAN (HMM E-Value=0.00015) Length = 99 Score = 29.5 bits (63), Expect = 2.1 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Frame = +1 Query: 76 CRPSPV*K*ILQE---EPIPVQHI----PAVRSRDHSYSVSAHPDLLYCPRQSSTQ 222 C PS + + L+ + PV+H+ +SRD YS++ H D L C +ST+ Sbjct: 22 CHPSSIDRHQLKGHLLDSFPVEHMHFCFERCKSRDKCYSINFHKDSLVCELNNSTK 77 >SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3176 Score = 29.1 bits (62), Expect = 2.8 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 390 AHSPGHLLKVFPSASITSPTRTDTSPLV-MLSPLPHQCLS 506 A+ P H V SA+ SP+ TDTS +V +S PH ++ Sbjct: 2226 ANIPLHSSSVTSSAAFCSPSNTDTSRVVGRVSQAPHNSIT 2265 >SB_4891| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 405 Score = 29.1 bits (62), Expect = 2.8 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = +1 Query: 115 EPIPVQHI----PAVRSRDHSYSVSAHPDLLYCPRQSSTQ 222 + PV+H+ +SRD YS++ H D L C +ST+ Sbjct: 42 DSFPVEHMHFCFERCKSRDKCYSINFHKDSLVCELNNSTK 81 >SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) Length = 836 Score = 28.7 bits (61), Expect = 3.8 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +2 Query: 278 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 454 D + T + NN + QG P G P A G+ ++ P P+ + + Sbjct: 229 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTYNPMFRPFPDNPQ 288 Query: 455 GY-QPTGNAIPT 487 GY QPT N +PT Sbjct: 289 GYQQPTTNQLPT 300 >SB_42630| Best HMM Match : Ets (HMM E-Value=0) Length = 631 Score = 28.3 bits (60), Expect = 5.0 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +3 Query: 405 HLLKVFPSASITSPTRTDTSPL-VMLSPLPHQCLSRSLVLLPTSPRNIP 548 HL+ +PS S S +R+ PL L P+P L S + PTSP +P Sbjct: 49 HLMASYPSTSRASASRSHLFPLRTGLPPVPP--LVSSPLPSPTSPGELP 95 >SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 99 Score = 28.3 bits (60), Expect = 5.0 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = +3 Query: 372 FPSLHRAHSPGHLLKVFPSASITSPT--RTDTSPLVMLSPLPHQCLSR 509 F L +AH+P H+L VFP+ T + + P V++ +C +R Sbjct: 3 FLYLSQAHTPPHILLVFPAKKCNRGTLSKNWSGPTVLIELAKGKCQTR 50 >SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 977 Score = 28.3 bits (60), Expect = 5.0 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +3 Query: 405 HLLKVFPSASITSPTRTDTSPL-VMLSPLPHQCLSRSLVLLPTSPRNIP 548 HL+ +PS S S +R+ PL L P+P L S + PTSP +P Sbjct: 395 HLMASYPSTSRASASRSHLFPLRTGLPPVPP--LVSSPLPSPTSPGELP 441 >SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 157 Score = 27.9 bits (59), Expect = 6.6 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = +2 Query: 356 GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPP 496 GNPP PV +F + P + Y A + P G ++P PP Sbjct: 105 GNPPYPPVDQYSAFPY--PPQDQQAPPYPAQNQYWNPQGTSLPPPPP 149 >SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) Length = 1467 Score = 27.9 bits (59), Expect = 6.6 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = +2 Query: 356 GNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493 G PA P + S+S TSP P S +Y Y PT + PTSP Sbjct: 448 GYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 496 >SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) Length = 2269 Score = 27.9 bits (59), Expect = 6.6 Identities = 22/84 (26%), Positives = 30/84 (35%) Frame = +2 Query: 299 YETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNA 478 Y N A+ Q R LGG P P Q + P +N +P G Sbjct: 445 YNRNPPRPARGQNPLRPLGGQNPPRPPDGQNPLRPLGGQNPP---RPSGGQNPLRPLGGQ 501 Query: 479 IPTSPPVPEQIARALAYIAKKHSS 550 P PP + R++ I HS+ Sbjct: 502 NPPRPPGKSDLPRSVHSIGTTHST 525 >SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 886 Score = 27.9 bits (59), Expect = 6.6 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +2 Query: 449 ENGYQPTGNAIPTSPPVPEQ 508 EN YQP P SPP P+Q Sbjct: 117 ENSYQPVELFAPNSPPKPQQ 136 >SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1) Length = 644 Score = 27.9 bits (59), Expect = 6.6 Identities = 12/36 (33%), Positives = 16/36 (44%) Frame = +2 Query: 353 GGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGY 460 G P +PV + + W G PIS+N N Y Sbjct: 146 GSLPDYIPVYSPETIVWGQSSGAPISINSSVIVNAY 181 >SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 964 Score = 27.9 bits (59), Expect = 6.6 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +2 Query: 371 VPVVAQGSFSWTSPEGVPISVNYVADENGY 460 +PV + G+ W G PIS+N N Y Sbjct: 171 IPVYSPGTIVWGQSSGAPISINSSLIVNAY 200 >SB_41099| Best HMM Match : VWA (HMM E-Value=0) Length = 3373 Score = 27.5 bits (58), Expect = 8.7 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +2 Query: 461 QPTGNAIPTSPPVPEQIARALAYIAKKHSSQEVS 562 +P +PT PPVP A A+ + K+ +++S Sbjct: 109 KPVPPTVPTRPPVPRPPAAAVYPLDKRRRGKDIS 142 >SB_17015| Best HMM Match : 7tm_1 (HMM E-Value=0.00027) Length = 251 Score = 27.5 bits (58), Expect = 8.7 Identities = 12/45 (26%), Positives = 20/45 (44%) Frame = -3 Query: 139 VCAVPVWVLLVEFIFIPDLGGNRCHHASEYYCEFHFCYSSKTSYV 5 +C P W+ ++ +F+P G R S Y F F + S + Sbjct: 154 LCWCPSWIWVITCLFVPSPHGKRAICTSTQYHIFRFIAAYSNSAI 198 >SB_3288| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 352 Score = 27.5 bits (58), Expect = 8.7 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = -1 Query: 525 ARARAICSGTGGEVGIA----LPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTAGGF 358 ARAR C +G+A +G Y TP+ + + +P AT GT Sbjct: 109 ARARRRCRARRSVIGVAGLLVSLIGLYTRRRELAAAFTRTPAVNQRATDPLATGGTDDVT 168 Query: 357 PPRLR 343 PP LR Sbjct: 169 PPTLR 173 >SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 754 Score = 27.5 bits (58), Expect = 8.7 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = -1 Query: 492 GEVGIALPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTAGGFPPRLR 343 G G+ + +G Y TP+ + +P AT GT PP LR Sbjct: 600 GVAGLLVLIGLYTRRRELAAAFTRTPAAKQRATDPLATEGTDDVTPPTLR 649 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,695,610 Number of Sequences: 59808 Number of extensions: 428749 Number of successful extensions: 1390 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 1225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1364 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1434459094 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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