Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31333
(591 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 34 0.33
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 34 0.33
BC104920-1|AAI04921.1| 812|Homo sapiens ATP-binding cassette, s... 33 0.57
BC104894-1|AAI04895.2| 812|Homo sapiens ATP-binding cassette, s... 33 0.57
AY851365-1|AAW31630.1| 812|Homo sapiens ABCB5beta protein. 33 0.57
AY234788-1|AAO73470.1| 812|Homo sapiens P-glycoprotein ABCB5 pr... 33 0.57
AY090613-1|AAM09027.1| 812|Homo sapiens P-glycoprotein protein. 33 0.57
AF399931-1|AAQ03033.1| 832|Homo sapiens P-glycoprotein protein. 33 0.57
AF319622-1|AAN76500.1| 681|Homo sapiens P-glycoprotein protein. 33 0.57
AB353947-1|BAF75364.1| 1257|Homo sapiens ATP-binding cassette, s... 33 0.57
Y00839-2|CAA68764.1| 749|Homo sapiens 70 kD alpha-glucosidase p... 33 0.76
Y00839-1|CAA68763.1| 952|Homo sapiens glucan 1, 4-alpha-glucosi... 33 0.76
X55080-1|CAC12967.1| 952|Homo sapiens acid alpha-glucosidase pr... 33 0.76
M34424-1|AAA52506.1| 952|Homo sapiens GAA protein. 33 0.76
DQ907243-1|ABI53718.1| 952|Homo sapiens alpha-glucosidase protein. 33 0.76
BC040431-1|AAH40431.1| 952|Homo sapiens glucosidase, alpha; aci... 33 0.76
BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J pr... 32 1.3
BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J pr... 32 1.3
BC113111-1|AAI13112.1| 1136|Homo sapiens CENPJ protein protein. 32 1.3
BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J pr... 32 1.3
BC092467-1|AAH92467.1| 375|Homo sapiens CENPJ protein protein. 32 1.3
AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J pr... 32 1.3
AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal P4.1-associ... 32 1.3
L19606-1|AAA03539.1| 450|Homo sapiens paired box homeotic prote... 31 2.3
BC001060-1|AAH01060.1| 450|Homo sapiens paired box gene 8 protein. 31 2.3
AK096229-1|BAC04732.1| 454|Homo sapiens protein ( Homo sapiens ... 31 2.3
AC016683-2|AAX88880.1| 450|Homo sapiens unknown protein. 31 2.3
BC047411-1|AAH47411.1| 592|Homo sapiens tubulin tyrosine ligase... 31 4.0
BC031288-1|AAH31288.1| 265|Homo sapiens similar to hypothetical... 31 4.0
BC030650-1|AAH30650.1| 592|Homo sapiens TTLL2 protein protein. 31 4.0
AY026506-1|AAK20169.1| 592|Homo sapiens testis specific protein... 31 4.0
AL021331-3|CAD92564.1| 592|Homo sapiens RP3-366N23.3 protein. 31 4.0
AK092772-1|BAC03972.1| 562|Homo sapiens protein ( Homo sapiens ... 31 4.0
BC036099-1|AAH36099.1| 716|Homo sapiens ARNT2 protein protein. 30 5.3
AF185610-1|AAG15310.1| 706|Homo sapiens aryl-hydrocarbon recept... 30 5.3
AB002305-1|BAA20766.2| 716|Homo sapiens KIAA0307 protein. 30 5.3
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 29 9.3
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 29 9.3
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 34.3 bits (75), Expect = 0.33
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 341 PRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493
PR+ GG P P + S+S TSP P S NY Y PT + PTSP
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 392 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493
S+S TSP P S NY Y PT + PTSP
Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 392 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493
S+S TSP P S NY Y PT + PTSP
Sbjct: 1761 SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 392 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493
S+S TSP P S NY Y PT + PTSP
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 34.3 bits (75), Expect = 0.33
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 341 PRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493
PR+ GG P P + S+S TSP P S NY Y PT + PTSP
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 392 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493
S+S TSP P S NY Y PT + PTSP
Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 392 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493
S+S TSP P S NY Y PT + PTSP
Sbjct: 1761 SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 392 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 493
S+S TSP P S NY Y PT + PTSP
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
>BC104920-1|AAI04921.1| 812|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 5 protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -3
Query: 568 FIAYFLRGMFLGDVGKSTSDLLRH------------WWGSGDSITSGLVSVLVGDVIDAD 425
F++YF++G+F G G+ + LRH W+ ++ T GL ++L D+
Sbjct: 302 FVSYFMQGLFYGRAGEILTMRLRHLAFKAMLYQDIAWFDEKENSTGGLTTILAIDIAQIQ 361
Query: 424 GNTFRR 407
G T R
Sbjct: 362 GATGSR 367
>BC104894-1|AAI04895.2| 812|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 5 protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -3
Query: 568 FIAYFLRGMFLGDVGKSTSDLLRH------------WWGSGDSITSGLVSVLVGDVIDAD 425
F++YF++G+F G G+ + LRH W+ ++ T GL ++L D+
Sbjct: 302 FVSYFMQGLFYGRAGEILTMRLRHLAFKAMLYQDIAWFDEKENSTGGLTTILAIDIAQIQ 361
Query: 424 GNTFRR 407
G T R
Sbjct: 362 GATGSR 367
>AY851365-1|AAW31630.1| 812|Homo sapiens ABCB5beta protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -3
Query: 568 FIAYFLRGMFLGDVGKSTSDLLRH------------WWGSGDSITSGLVSVLVGDVIDAD 425
F++YF++G+F G G+ + LRH W+ ++ T GL ++L D+
Sbjct: 302 FVSYFMQGLFYGRAGEILTMRLRHLAFKAMLYQDIAWFDEKENSTGGLTTILAIDIAQIQ 361
Query: 424 GNTFRR 407
G T R
Sbjct: 362 GATGSR 367
>AY234788-1|AAO73470.1| 812|Homo sapiens P-glycoprotein ABCB5
protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -3
Query: 568 FIAYFLRGMFLGDVGKSTSDLLRH------------WWGSGDSITSGLVSVLVGDVIDAD 425
F++YF++G+F G G+ + LRH W+ ++ T GL ++L D+
Sbjct: 302 FVSYFMQGLFYGRAGEILTMRLRHLAFKAMLYQDIAWFDEKENSTGGLTTILAIDIAQIQ 361
Query: 424 GNTFRR 407
G T R
Sbjct: 362 GATGSR 367
>AY090613-1|AAM09027.1| 812|Homo sapiens P-glycoprotein protein.
Length = 812
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -3
Query: 568 FIAYFLRGMFLGDVGKSTSDLLRH------------WWGSGDSITSGLVSVLVGDVIDAD 425
F++YF++G+F G G+ + LRH W+ ++ T GL ++L D+
Sbjct: 302 FVSYFMQGLFYGRAGEILTMRLRHLAFKAMLYQDIAWFDEKENSTGGLTTILAIDIAQIQ 361
Query: 424 GNTFRR 407
G T R
Sbjct: 362 GATGSR 367
>AF399931-1|AAQ03033.1| 832|Homo sapiens P-glycoprotein protein.
Length = 832
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -3
Query: 568 FIAYFLRGMFLGDVGKSTSDLLRH------------WWGSGDSITSGLVSVLVGDVIDAD 425
F++YF++G+F G G+ + LRH W+ ++ T GL ++L D+
Sbjct: 322 FVSYFMQGLFYGRAGEILTMRLRHLAFKAMLYQDIAWFDEKENSTGGLTTILAIDIAQIQ 381
Query: 424 GNTFRR 407
G T R
Sbjct: 382 GATGSR 387
>AF319622-1|AAN76500.1| 681|Homo sapiens P-glycoprotein protein.
Length = 681
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -3
Query: 568 FIAYFLRGMFLGDVGKSTSDLLRH------------WWGSGDSITSGLVSVLVGDVIDAD 425
F++YF++G+F G G+ + LRH W+ ++ T GL ++L D+
Sbjct: 171 FVSYFMQGLFYGRAGEILTMRLRHLAFKAMLYQDIAWFDEKENSTGGLTTILAIDIAQIQ 230
Query: 424 GNTFRR 407
G T R
Sbjct: 231 GATGSR 236
>AB353947-1|BAF75364.1| 1257|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 5 protein.
Length = 1257
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -3
Query: 568 FIAYFLRGMFLGDVGKSTSDLLRH------------WWGSGDSITSGLVSVLVGDVIDAD 425
F++YF++G+F G G+ + LRH W+ ++ T GL ++L D+
Sbjct: 747 FVSYFMQGLFYGRAGEILTMRLRHLAFKAMLYQDIAWFDEKENSTGGLTTILAIDIAQIQ 806
Query: 424 GNTFRR 407
G T R
Sbjct: 807 GATGSR 812
>Y00839-2|CAA68764.1| 749|Homo sapiens 70 kD alpha-glucosidase
protein.
Length = 749
Score = 33.1 bits (72), Expect = 0.76
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 254 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 394
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 302 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 348
>Y00839-1|CAA68763.1| 952|Homo sapiens glucan 1,
4-alpha-glucosidase protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.76
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 254 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 394
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>X55080-1|CAC12967.1| 952|Homo sapiens acid alpha-glucosidase
protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.76
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 254 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 394
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>M34424-1|AAA52506.1| 952|Homo sapiens GAA protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.76
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 254 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 394
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>DQ907243-1|ABI53718.1| 952|Homo sapiens alpha-glucosidase protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.76
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 254 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 394
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>BC040431-1|AAH40431.1| 952|Homo sapiens glucosidase, alpha; acid
(Pompe disease, glycogen storage disease type II)
protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.76
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 254 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 394
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 FSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKKH-SSQEVSDKS 571
FS + P+ N + +EN PTG +I V EQI A +KH S EV++
Sbjct: 264 FSEAQYQEAPVEKNNLKEENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIE 323
Query: 572 HRRI 583
R I
Sbjct: 324 ERPI 327
>BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 FSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKKH-SSQEVSDKS 571
FS + P+ N + +EN PTG +I V EQI A +KH S EV++
Sbjct: 264 FSEAQYQEAPVEKNNLKEENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIE 323
Query: 572 HRRI 583
R I
Sbjct: 324 ERPI 327
>BC113111-1|AAI13112.1| 1136|Homo sapiens CENPJ protein protein.
Length = 1136
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 FSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKKH-SSQEVSDKS 571
FS + P+ N + +EN PTG +I V EQI A +KH S EV++
Sbjct: 264 FSEAQYQEAPVEKNNLKEENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIE 323
Query: 572 HRRI 583
R I
Sbjct: 324 ERPI 327
>BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 FSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKKH-SSQEVSDKS 571
FS + P+ N + +EN PTG +I V EQI A +KH S EV++
Sbjct: 264 FSEAQYQEAPVEKNNLKEENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIE 323
Query: 572 HRRI 583
R I
Sbjct: 324 ERPI 327
>BC092467-1|AAH92467.1| 375|Homo sapiens CENPJ protein protein.
Length = 375
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 FSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKKH-SSQEVSDKS 571
FS + P+ N + +EN PTG +I V EQI A +KH S EV++
Sbjct: 264 FSEAQYQEAPVEKNNLKEENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIE 323
Query: 572 HRRI 583
R I
Sbjct: 324 ERPI 327
>AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 FSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKKH-SSQEVSDKS 571
FS + P+ N + +EN PTG +I V EQI A +KH S EV++
Sbjct: 264 FSEAQYQEAPVEKNNLKEENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIE 323
Query: 572 HRRI 583
R I
Sbjct: 324 ERPI 327
>AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal
P4.1-associated protein protein.
Length = 1338
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 FSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKKH-SSQEVSDKS 571
FS + P+ N + +EN PTG +I V EQI A +KH S EV++
Sbjct: 264 FSEAQYQEAPVEKNNLKEENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIE 323
Query: 572 HRRI 583
R I
Sbjct: 324 ERPI 327
>L19606-1|AAA03539.1| 450|Homo sapiens paired box homeotic protein
protein.
Length = 450
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 275 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 454
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 455 GYQP 466
G+ P
Sbjct: 406 GHTP 409
>BC001060-1|AAH01060.1| 450|Homo sapiens paired box gene 8 protein.
Length = 450
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 275 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 454
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 455 GYQP 466
G+ P
Sbjct: 406 GHTP 409
>AK096229-1|BAC04732.1| 454|Homo sapiens protein ( Homo sapiens
cDNA FLJ38910 fis, clone NT2NE2006813, weakly similar to
CELL SURFACE GLYCOPROTEIN 1 PRECURSOR. ).
Length = 454
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 342 HVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPLPHQCLSRSLVL 521
H +LV L S H + H L + P S+ SP R SPL+ P P + L
Sbjct: 32 HYSLVSPHRLLMSPHYSPMSPHRLLMSPHYSLVSPHRLLMSPLLSGVPSPPSDVPSLLSG 91
Query: 522 LPTSPRNI 545
+P+ P ++
Sbjct: 92 VPSLPSDV 99
>AC016683-2|AAX88880.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 275 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 454
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 455 GYQP 466
G+ P
Sbjct: 406 GHTP 409
>BC047411-1|AAH47411.1| 592|Homo sapiens tubulin tyrosine
ligase-like family, member 2 protein.
Length = 592
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 333 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 476
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>BC031288-1|AAH31288.1| 265|Homo sapiens similar to hypothetical
protein MGC49416 protein.
Length = 265
Score = 30.7 bits (66), Expect = 4.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 230 EGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQG 391
+GY AE G+ + DGS T G A+ + PR GG A+ A+G
Sbjct: 26 QGY-AEPEGVGDAVRADGSVTLVLPQTRGPASSHRESPRGSGGAEAALEEAARG 78
>BC030650-1|AAH30650.1| 592|Homo sapiens TTLL2 protein protein.
Length = 592
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 333 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 476
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>AY026506-1|AAK20169.1| 592|Homo sapiens testis specific protein
NYD-TSPG protein.
Length = 592
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 333 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 476
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>AL021331-3|CAD92564.1| 592|Homo sapiens RP3-366N23.3 protein.
Length = 592
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 333 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 476
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>AK092772-1|BAC03972.1| 562|Homo sapiens protein ( Homo sapiens
cDNA FLJ35453 fis, clone SMINT2004414. ).
Length = 562
Score = 30.7 bits (66), Expect = 4.0
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 362 PPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKK 541
PP P+ A+ EG+P+ + + +E P+ P SPP P A + ++
Sbjct: 486 PPPPPLKAE-----QEEEGLPLPLANIKEE---PPSPGTPPQSPPAPPVFLSASCFDSQD 537
Query: 542 HSS-----QEVSDKSHRR 580
HS+ +EV K+H R
Sbjct: 538 HSAFEMEEEEVDSKAHLR 555
>BC036099-1|AAH36099.1| 716|Homo sapiens ARNT2 protein protein.
Length = 716
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 365 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 493
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 582 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 624
>AF185610-1|AAG15310.1| 706|Homo sapiens aryl-hydrocarbon receptor
nuclear translocator 2 protein.
Length = 706
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 365 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 493
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 571 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 613
>AB002305-1|BAA20766.2| 716|Homo sapiens KIAA0307 protein.
Length = 716
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 365 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 493
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 581 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 623
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 29.5 bits (63), Expect = 9.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 214 YSDGGNRGDRDGQKRSRSGHG 152
Y DGG+ GDR G + R G G
Sbjct: 448 YQDGGHHGDRGGGRGGRGGRG 468
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 29.5 bits (63), Expect = 9.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 214 YSDGGNRGDRDGQKRSRSGHG 152
Y DGG+ GDR G + R G G
Sbjct: 449 YQDGGHHGDRGGGRGGRGGRG 469
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,151,635
Number of Sequences: 237096
Number of extensions: 2259999
Number of successful extensions: 12714
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 12012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12661
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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