Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31331
         (602 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371     28   6.5  
12_01_1019 - 10398880-10399314,10399401-10399481,10399560-103996...    27   8.7  
12_01_0788 + 7192937-7192994,7193074-7193160,7193242-7193307,719...    27   8.7  

>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
          Length = 437

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 583 NSLNELVQSLKEIYNRFINVTLHRTEVC*VKKK*TQYS*PKSTCYYPQ 440
           +S    ++  K+ ++RF N+T H + V  V +  T ++  K  C  PQ
Sbjct: 307 SSAASAIERFKDAHDRFQNITHHGSMVAAVMECGTDHTQEKKMCEEPQ 354


>12_01_1019 -
           10398880-10399314,10399401-10399481,10399560-10399652,
           10399784-10399999,10403837-10403935,10404244-10404867,
           10404946-10405033,10405167-10405430,10406437-10406504
          Length = 655

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 107 CSTFCMFYLNVIDNFFSK 54
           CSTFC  YLN I+  F++
Sbjct: 51  CSTFCSMYLNGIETRFNR 68


>12_01_0788 +
           7192937-7192994,7193074-7193160,7193242-7193307,
           7193447-7193555,7194522-7194785,7194919-7195006,
           7195085-7195708,7196017-7196140,7196195-7196337,
           7196434-7196649,7196781-7196873,7196952-7197032,
           7197120-7197504,7197599-7197636
          Length = 791

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 107 CSTFCMFYLNVIDNFFSK 54
           CSTFC  YLN I+  F++
Sbjct: 135 CSTFCSMYLNGIETRFNR 152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,529,926
Number of Sequences: 37544
Number of extensions: 215511
Number of successful extensions: 277
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)