Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31331
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002198-7|AAF99935.1|  693|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    28   4.5  

>AF002198-7|AAF99935.1|  693|Caenorhabditis elegans Hypothetical
           protein F35F10.10 protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 160 FLVKNLSRIVKFFHFPIYVVRSVCFI 83
           +LVKN+ R VKF++F  + VR   FI
Sbjct: 134 WLVKNMERKVKFYYFKGFPVRKTEFI 159


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 586 CNSLNELVQSLK-EIYNRFINVTLHRTEVC 500
           CN   +LV  L+ + +NRF+N++ H  E C
Sbjct: 419 CNEGLKLVSFLQSQTFNRFVNLSPHEAEAC 448


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 586 CNSLNELVQSLK-EIYNRFINVTLHRTEVC 500
           CN   +LV  L+ + +NRF+N++ H  E C
Sbjct: 419 CNEGLKLVSFLQSQTFNRFVNLSPHEAEAC 448


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,391,747
Number of Sequences: 27780
Number of extensions: 241599
Number of successful extensions: 391
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)