Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31330
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.60
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 1.4
SB_6360| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0092) 30 1.8
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 29 3.2
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 29 3.2
SB_56788| Best HMM Match : 7tm_1 (HMM E-Value=4e-32) 28 5.6
SB_27229| Best HMM Match : 7tm_1 (HMM E-Value=0.0014) 28 5.6
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 5.6
SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44) 28 5.6
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 28 5.6
SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 27 9.7
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 397 DTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGK 540
D +++ K + +LE + DL+ +KRKD+ I+DLN V D + K
Sbjct: 400 DELRKTKKKMQVQYEKLEHQLDDLKVQLKRKDVVIADLNKVVEDYKRK 447
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 421 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 600
++ E ARL L + R + E DL++ NDL V+ KK+++ N+F L+
Sbjct: 5267 EFEEDYARLAKLNTQLVTELDRCNEEFKDLDALKNDLES--VELLEKKLAETNNQFEDLE 5324
Query: 601 KKAAEFNFP*PIE 639
++++E + P+E
Sbjct: 5325 ERSSEISEKLPVE 5337
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +1
Query: 448 EDEKFD--LEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK--YENKFAKLQKKAAE 615
++EKF L ++ RKD I +LN+++ L+G + K T ++++K EN+ K K+ E
Sbjct: 997 QNEKFSETLNSVISRKDKAIDELNAKIRHLQGDYDK-TRRQLNKILVENENLKGSKEDLE 1055
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 394 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 522
ED + R + +RI RLE DL+ + +R SD+N++V
Sbjct: 22 EDLMTRRFRGLEDRIGRLESTVSDLQLLQRRNGRFFSDINTRV 64
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 394 EDTIKRVCKDYHERIARLE---DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKK 564
ED +++V K +A L+ +EK D E +++ + +++LN+Q+ DL + TL++
Sbjct: 1901 EDELEKVRKKEVSLLATLDTLREEKKDQEQMLQDNGIRLAELNTQIQDLFEE--NKTLEE 1958
Query: 565 VSKYENKFAKLQKKAAE 615
K N KL+ A E
Sbjct: 1959 --KVSNDSYKLESAAGE 1973
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 385 DANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKK 564
D E TIK + ++ + R +DE DL V +K+ E L++Q++DLR K +
Sbjct: 3021 DIAESTIKNIKQEKN----RFQDEVNDLHGKVSQKNSENELLHAQLDDLR-KQITGYQGN 3075
Query: 565 VSKYENKFAKLQKK 606
+ E +LQ++
Sbjct: 3076 IKSLEENSNRLQER 3089
>SB_6360| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0092)
Length = 107
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 421 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 600
D + ++ L + DL+ V D ++ DLN++V+DL K V KV K L
Sbjct: 26 DLNAKVHDLNTKVHDLDTKVHDLDTKVHDLNTKVHDLNTK-VHDLNTKVHDLNTKVHDLN 84
Query: 601 KKAAEFN 621
K + N
Sbjct: 85 TKVHDLN 91
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 391 NEDTIKRV-CKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKV 567
NE I R CKD I+R LE ++ I L + +N+L K+
Sbjct: 366 NELVISRKKCKDQGAEISRQSSHIGKLEATKLSQETNIRSLKANINELN--------SKL 417
Query: 568 SKYENKFAKLQKK 606
SKYE + +L+K+
Sbjct: 418 SKYEGDYEELEKQ 430
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 421 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK--KVSKYENKFAK 594
D + ++ L + DL V + ++ DLN++VNDL K K + KV+ K
Sbjct: 348 DLNTKVHDLNTKLHDLNTKVHDLNAKVHDLNTKVNDLNTKNTKVNDQNTKVNDLNTKVHD 407
Query: 595 LQKKAAEFN 621
L K + N
Sbjct: 408 LNAKVHDLN 416
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 421 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 600
D + ++ L + DL V + ++ DLN++VNDL K V KV K L
Sbjct: 299 DLNTKLHNLNTKLHDLNTKVHDLNTKLHDLNTKVNDLNTK-VHDFNTKVHDLNTKVHDLN 357
Query: 601 KKAAEFN 621
K + N
Sbjct: 358 TKLHDLN 364
>SB_56788| Best HMM Match : 7tm_1 (HMM E-Value=4e-32)
Length = 524
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 118 PPLLLCWFRVSYCKN*KMALRDGLANTS 35
PP +LC F +S C + A+ D AN S
Sbjct: 116 PPTVLCHFHLSSCLTGQTAMNDSKANKS 143
>SB_27229| Best HMM Match : 7tm_1 (HMM E-Value=0.0014)
Length = 309
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 118 PPLLLCWFRVSYCKN*KMALRDGLANTS 35
PP +LC F +S C + A+ D AN S
Sbjct: 108 PPTVLCHFHLSSCLTGQTAMNDSKANKS 135
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +1
Query: 385 DANEDTIKRVCKDYHERIARLEDE 456
+ +E+ +++V +DY E+IARL++E
Sbjct: 144 EPDEEQLEQVRRDYEEQIARLQEE 167
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +1
Query: 388 ANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 549
A+++ I+ + ++++++DE +L+ R+ EI DL +++N+L +
Sbjct: 1352 ASKEYIEGQLESLKAQMSKIKDENENLKESDARRQQEILDLENRINELENMLAR 1405
>SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44)
Length = 788
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 394 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 573
++T+ RV D R L++E+ + + D E+SD+ SQ+ + K V K
Sbjct: 374 QETLTRV--DLENRCQSLQEEQ---NFKKQMYDKELSDIRSQLKTVETKRVVVETDYKDK 428
Query: 574 YENKFA-KLQKKAAEFN 621
YE A KLQ+ +++
Sbjct: 429 YEGLMAEKLQELREDYD 445
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 373 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 510
+ + +NE + RV D E + L+ +K DLE I ++ + +L
Sbjct: 51 EELQTSNESELMRVRSDLEEMTSLLQSKKVDLEKIKEQNEKAAKEL 96
>SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 496 EISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKK 606
EI +V++L+G+F K + + + + F KLQ K
Sbjct: 112 EIEGFFDEVHELKGQFNKYKMNTIPRLQEVFKKLQSK 148
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 394 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 573
E I+ E+I L +E +L+ +K+KD IS+LN + F +VS
Sbjct: 1048 ESEIEASVASKDEKITILTEEITELKQELKKKDGIISELNDNLT----SFEDEHDSEVSV 1103
Query: 574 YENKFAKLQKKAAE 615
+ K Q++ AE
Sbjct: 1104 FNENLRKQQEQTAE 1117
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 373 KNIDDANEDTIKRVCKDYHERIARLE---DEKFDLEYIVKRKDMEISDLNSQVNDLRGKF 543
KN NED + +++ E IARL+ D + + VKR+ + ++ +V+D +
Sbjct: 732 KNKPHINEDPKDALLREFQEEIARLKNELDRRGGKKKKVKRRREDGTE--EEVDDEDEEQ 789
Query: 544 VKPTLKKVSKYENKFAKLQKKA 609
+ L+++ K E + + +KKA
Sbjct: 790 SQAQLEEIMKAEQEKIEQEKKA 811
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,503,024
Number of Sequences: 59808
Number of extensions: 227873
Number of successful extensions: 706
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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