Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31330
(639 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.092
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.092
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 29 2.0
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.0
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 29 3.4
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 4.5
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 4.5
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 28 6.0
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.0
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 28 6.0
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 6.0
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 27 7.9
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.092
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 373 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 552
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 553 TLKKVSKYENKF 588
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.092
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 373 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 552
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 553 TLKKVSKYENKF 588
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +1
Query: 430 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 546
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII 917
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 367 KPKNIDDANEDTIKRVCKDYHERIARLED 453
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 391 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 570
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 571 KYENKFAKLQKKAAE 615
+ + F L +K AE
Sbjct: 275 EVDIIFKDLVEKEAE 289
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 320 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 481
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 377 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 496
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 430 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKF 588
E++ E E ++ +K+MEI+ L QV R K + + ENKF
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKF 130
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 478 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 615
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 436 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 555
++ L K L ++++KD EIS+ NS + K VK T
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLT 156
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 397 DTIKRVCKDYHERIARLEDEKFDLEYIV 480
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +1
Query: 373 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 537
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D +
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKDQK- 286
Query: 538 KFVKPTLKKVSKYENKFAKLQKK 606
K +K + K+ ++ KL K+
Sbjct: 287 KLLKEQKDAIDKF-SEDQKLMKR 308
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,237,075
Number of Sequences: 28952
Number of extensions: 161347
Number of successful extensions: 570
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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