Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31328
         (344 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   3.2  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    22   5.6  
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    21   9.7  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    21   9.7  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    21   9.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 213  ARADVTTHTKKSSNWRHLMSEQFQCTIE 130
            AR +++ H K S+ W  + +E  + T E
Sbjct: 1010 ARQEMSKHRKGSAEWNKINNEAHKTTRE 1037


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +3

Query: 24  SNAVIIFKRKSINGNNNNIDIVYFVK*LVTCKL 122
           +N ++I++  ++  ++ +ID+ YF   + TC L
Sbjct: 136 NNGMVIWQPPAVYKSSCSIDVEYFPYDVQTCVL 168


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 216 YARADVTTHTKKSSNWRHLMSEQFQCT 136
           Y+ ADV +H    S W  + ++ +  T
Sbjct: 7   YSLADVKSHNTNKSTWIVIHNDIYDVT 33


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 258 LWLREGIGNTQSTWYARADVTTHTKK 181
           LWL      T+  W A++D    T+K
Sbjct: 123 LWLLSQTWITRHLWMAKSDRNASTEK 148


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 297 KKAKASTIPLPRELWLREGIGNTQSTWYAR 208
           K A+ +  P   E W RE    T  +W  R
Sbjct: 845 KLARIAERPYSVEAWQREWSTTTSGSWTRR 874


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,314
Number of Sequences: 2352
Number of extensions: 5495
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)