Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31327
         (690 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g73990.1 68414.m08569 peptidase U7 family protein similar to ...    28   5.1  
At2g29510.1 68415.m03584 expressed protein                             27   8.9  

>At1g73990.1 68414.m08569 peptidase U7 family protein similar to
           protease IV GB:AAA57008 from [Escherichia coli];
           contains Pfam profile PF01343: Peptidase family U7
          Length = 677

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
 Frame = +2

Query: 404 IIRYDNDVAPEGYHYLYETENKILAEEAGKVENVGTENEGIKVKGFYEYVGPDGVTY-RV 580
           +I   +DVA  G +Y+    N I+AE      ++G       +   YE +G +  T  R 
Sbjct: 450 VIASMSDVAASGGYYMAMAANAIVAENLTLTGSIGVVTARFTLAKLYEKIGFNKETISRG 509

Query: 581 DYT----ADENGFVADGAHIPNKSSRDQYFXGIFRKK 679
            Y     A+E     + A +  KS++  Y   +FR K
Sbjct: 510 KYAELLGAEERPLKPEEAELFEKSAQHAY--QLFRDK 544


>At2g29510.1 68415.m03584 expressed protein
          Length = 839

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 447 TCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 569
           +C+ PR+R +   P+RSRTL  ++  +  + S    A  +S
Sbjct: 362 SCSAPRSRKAESSPSRSRTLDRRSTETLPKQSDQKPAKVLS 402


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,960,749
Number of Sequences: 28952
Number of extensions: 189580
Number of successful extensions: 643
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)