Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31326
(628 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.1
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 23 3.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 9.8
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 614 RIPSNLAATKASPGSDTASANVWRRTLSPPTVTSS 510
R S + KA PGS A + ++ LSP + SS
Sbjct: 886 RPASQATSVKAEPGSIMAMSESSKKVLSPGELLSS 920
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = +3
Query: 72 RLLKTTMGKISLFFLALIASSVMALYRVPLHRMKTA 179
R+++ +GK+ + + + V++LY P+ + A
Sbjct: 76 RVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAA 111
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 340 TPDPPTFWVPSKKCHY 387
T PP W P KC++
Sbjct: 414 TSPPPEDWKPLDKCYF 429
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 7.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 93 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPL 263
GK+++ + S + ++ V L + VG +E+ K DVTG P PL
Sbjct: 289 GKLNVNEFYMAFSKLYSVSVVSLDKSLEVNHISARVGDNVEI---KCDVTGTPPPPL 342
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 264 SNYLDAQYYGVISIGTPP 317
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 264 SNYLDAQYYGVISIGTPP 317
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 264 SNYLDAQYYGVISIGTPP 317
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 264 SNYLDAQYYGVISIGTPP 317
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 264 SNYLDAQYYGVISIGTPP 317
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 264 SNYLDAQYYGVISIGTPP 317
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 264 SNYLDAQYYGVISIGTPP 317
+NY QYY +I+I P
Sbjct: 107 TNYKKLQYYNIINIEQIP 124
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 264 SNYLDAQYYGVISIGTPP 317
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,035
Number of Sequences: 438
Number of extensions: 3970
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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