Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31324
         (471 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g02360.1 68414.m00182 chitinase, putative similar to chitinas...    30   0.69 
At3g54420.1 68416.m06019 class IV chitinase (CHIV) almost identi...    29   1.2  
At5g40100.1 68418.m04864 disease resistance protein (TIR-NBS-LRR...    28   3.7  
At5g27240.1 68418.m03249 DNAJ heat shock N-terminal domain-conta...    27   4.8  
At4g32820.1 68417.m04668 expressed protein ; expression supporte...    27   4.8  
At2g36770.1 68415.m04510 UDP-glucoronosyl/UDP-glucosyl transfera...    27   4.8  
At1g70680.1 68414.m08148 caleosin-related family protein similar...    27   6.4  
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38...    27   8.5  

>At1g02360.1 68414.m00182 chitinase, putative similar to chitinase
           precursor GI:5880845 from [Petroselinum crispum]
          Length = 272

 Score = 30.3 bits (65), Expect = 0.69
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +1

Query: 145 HKYGPSGTVQKFDGLCVLPLNIVNEKIYVF---LWFW 246
           + YGP+G    FDGL   P  + N  +  F   LWFW
Sbjct: 152 YNYGPAGRALGFDGL-RNPETVSNNSVIAFQTALWFW 187


>At3g54420.1 68416.m06019 class IV chitinase (CHIV) almost identical
           to class IV chitinase from GI:2597826 [Arabidopsis
           thaliana]
          Length = 273

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +1

Query: 151 YGPSGTVQKFDGLCVLPLNIVNEKIYVF---LWFW 246
           YGP+GT   FDGL   P  +  + +  F   LW+W
Sbjct: 183 YGPAGTAIGFDGLNA-PETVATDPVISFKTALWYW 216


>At5g40100.1 68418.m04864 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1017

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 128 TLGNTLAIGSTRSLGLHFCE 69
           T+ +TL +G T S+ LH CE
Sbjct: 510 TIHDTLGMGQTESISLHICE 529


>At5g27240.1 68418.m03249 DNAJ heat shock N-terminal
           domain-containing protein
          Length = 1104

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 37  NFQLMAVTWSASQKWSPRERVDPMARVFPKVTK 135
           NF+L    +  +Q WS  + +D M R++ ++ K
Sbjct: 482 NFELTTSCFGVNQVWSMYDPIDGMPRLYARIDK 514


>At4g32820.1 68417.m04668 expressed protein ; expression supported by
            MPSS
          Length = 1817

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
 Frame = -1

Query: 357  WRKATACAQQVETDAGSSDNG--HAV*QRNST-QDR*YHKPKPEEHVDLLVDDIQWQNTQ 187
            WRK +A +Q+VET    S      ++   NS  Q    H+     + D L   + + + +
Sbjct: 1121 WRKNSALSQRVETSRRRSRRCLLMSLALANSPDQQSEIHELLALVYYDSLQSVVPFYDQR 1180

Query: 186  AIEFLHRTGWTVFMEGAFSYFRKHSGHR---VHAF 91
            ++       WT F E +  +F K   HR    HAF
Sbjct: 1181 SVLPSKDATWTRFCENSMKHFNKAFSHRQDWSHAF 1215


>At2g36770.1 68415.m04510 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 496

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 12  FMDFFLDGEFSTYGSDVVSFTEMEP 86
           F+D  ++ E+++YG  V +F E+EP
Sbjct: 210 FLDEMVEAEYTSYGVIVNTFQELEP 234


>At1g70680.1 68414.m08148 caleosin-related family protein similar to
           Ca+2-binding EF hand protein GB:AAB71227 [Glycine max];
           contains Pfam profilePF05042: Caleosin related protein
          Length = 192

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 388 LQIGDWFVLYQLGKNIDPLIYKELM 462
           L  G+W VLY L K+   L++KE++
Sbjct: 147 LAFGEWKVLYNLCKDKSGLLHKEIV 171


>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
           Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
           contains Pfam profile: PF00085 Thioredoxin
          Length = 148

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = +3

Query: 279 FVIPHGRCR--WTPRPSLLAARTQSPC 353
           F + H R    WTPRP +   +  SPC
Sbjct: 12  FQVTHFRSTKPWTPRPEIYPFKVNSPC 38


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,000,621
Number of Sequences: 28952
Number of extensions: 227710
Number of successful extensions: 596
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 801831960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)