Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31323
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   6.2  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     21   8.2  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 407 HDAPTSACAKRLSYPCLRRQSEP*TDP 327
           ++ P      R  +P LRR++EP  +P
Sbjct: 99  NNRPVYISQPRPPHPRLRREAEPEAEP 125



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 407 HDAPTSACAKRLSYPCLRRQSEP*TDP 327
           ++ P      R  +P LRR++EP  +P
Sbjct: 155 NNRPVYISQPRPPHPRLRREAEPEAEP 181


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 71  FSEHSVVLLGE 103
           FSEH  V+LGE
Sbjct: 210 FSEHDSVMLGE 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,314
Number of Sequences: 438
Number of extensions: 2037
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)