Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31323
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08850.2 68417.m01455 leucine-rich repeat family protein / pr... 32 0.29
At5g38360.1 68418.m04630 esterase/lipase/thioesterase family pro... 29 1.5
At3g05820.1 68416.m00653 beta-fructofuranosidase, putative / inv... 29 1.5
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 29 2.0
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 29 2.0
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 29 2.0
At3g58110.1 68416.m06480 expressed protein 28 4.7
At2g42370.1 68415.m05243 expressed protein 28 4.7
At4g08850.1 68417.m01454 leucine-rich repeat family protein / pr... 27 6.2
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 27 8.3
>At4g08850.2 68417.m01455 leucine-rich repeat family protein / protein
kinase family protein contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 1009
Score = 31.9 bits (69), Expect = 0.29
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 89 VLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLN 229
+LLGE + K S+ L K D S + V GT GYV T F+ L+
Sbjct: 911 ILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPGTLFDPLD 957
>At5g38360.1 68418.m04630 esterase/lipase/thioesterase family
protein low similarity to SP|P49323 Non-heme
chloroperoxidase (EC 1.11.1.10) (Chloride peroxidase)
{Streptomyces lividans}; contains Interpro entry
IPR000379
Length = 242
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 68 GFSEHSVVLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGG 193
GF ++V LLG+ + + T+ GTLQ +F+E G
Sbjct: 94 GFDSYAVSLLGQGESDEPLGTVAGTLQTHASDIADFIESNLG 135
>At3g05820.1 68416.m00653 beta-fructofuranosidase, putative /
invertase, putative / saccharase, putative /
beta-fructosidase, putative similar to neutral invertase
[Daucus carota] GI:4200165; contains Pfam profile
PF04853: Plant neutral invertase
Length = 633
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 159 SSVFWSVPLKVSESLVCFFSPSSTTECS 76
SS+FW L++ ES VC + S +CS
Sbjct: 596 SSLFWEEDLELLESCVCVLTKSGRKKCS 623
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 218 EKLNAPQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVCVN 361
++L QQ+QF+ + H+L S+QL QL T + F S C N
Sbjct: 756 QRLQQQQQQQFLSPQSQLPHHQLQSQQLQQLPTLSQGHQF--PSSCTN 801
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 218 EKLNAPQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVCVN 361
++L QQ+QF+ + H+L S+QL QL T + F S C N
Sbjct: 755 QRLQQQQQQQFLSPQSQLPHHQLQSQQLQQLPTLSQGHQF--PSSCTN 800
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 218 EKLNAPQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVCVN 361
++L QQ+QF+ + H+L S+QL QL T + F S C N
Sbjct: 756 QRLQQQQQQQFLSPQSQLPHHQLQSQQLQQLPTLSQGHQF--PSSCTN 801
>At3g58110.1 68416.m06480 expressed protein
Length = 784
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 176 VEGTGGYVFSSTNFEKLNAPQQKQ 247
V+G+GG V S+T EKL Q+++
Sbjct: 687 VKGSGGLVLSTTEIEKLRLKQEEE 710
>At2g42370.1 68415.m05243 expressed protein
Length = 715
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 176 VEGTGGYVFSSTNFEKLNAPQQKQ 247
V+GTGG V S+ EKL ++K+
Sbjct: 624 VKGTGGLVLSTAEIEKLRLKEEKE 647
>At4g08850.1 68417.m01454 leucine-rich repeat family protein / protein
kinase family protein contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 1045
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 89 VLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYV 199
+LLGE + K S+ L K D S + V GT GYV
Sbjct: 911 ILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYV 947
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 27.1 bits (57), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 410 LHDAPTSACAKRLSYPCLRRQSEP 339
+H+ P C ++ PCLR + +P
Sbjct: 676 IHEPPPPGCESNINMPCLRYKYQP 699
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,756,966
Number of Sequences: 28952
Number of extensions: 170656
Number of successful extensions: 456
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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