Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31322
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 255 NRNCRTISYVMFCLYFNL 202
           N N +T S V  C Y++L
Sbjct: 103 NNNFKTYSNVTTCSYYSL 120


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 205 IKIQAEHYVTYCSTIAI 255
           +KI+ + Y+ YCS+  +
Sbjct: 118 VKIRTKVYLVYCSSALV 134


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 205 IKIQAEHYVTYCSTIAI 255
           +KI+ + Y+ YCS+  +
Sbjct: 114 VKIRTKVYLVYCSSALV 130


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 382 HNSPSY*IDNSS 347
           H SPS+ +DNS+
Sbjct: 248 HKSPSHSVDNSN 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,540
Number of Sequences: 336
Number of extensions: 2230
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)