Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31322
         (532 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   7.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   7.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   7.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/57 (22%), Positives = 26/57 (45%)
 Frame = +3

Query: 90  YPRMRRRGSPLMTLCIVYSIIILIAELVLGFHIK*INVN*NTSRTLRNLLFYNCDYV 260
           Y + +      +T+ +V++I   I   ++      + +N    RT    LFYN D++
Sbjct: 294 YAKHKNNRRVWLTILLVWAISAAIGSPIV------LGLNNTPDRTPDQCLFYNTDFI 344


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 264 CLRNRNCRTISYVMFCLYFNLH*STLYESPIP 169
           CL+N      SY +  +YFNL  +  Y+   P
Sbjct: 98  CLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 129


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 264 CLRNRNCRTISYVMFCLYFNLH*STLYESPIP 169
           CL+N      SY +  +YFNL  +  Y+   P
Sbjct: 103 CLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 134


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 264 CLRNRNCRTISYVMFCLYFNLH*STLYESPIP 169
           CL+N      SY +  +YFNL  +  Y+   P
Sbjct: 103 CLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,440
Number of Sequences: 438
Number of extensions: 2738
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)