Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31321
(402 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6DGH3 Cluster: Zgc:92922; n=13; Euteleostomi|Rep: Zgc:... 86 3e-16
UniRef50_P60468 Cluster: Protein transport protein Sec61 subunit... 84 9e-16
UniRef50_Q5BSB6 Cluster: SJCHGC05179 protein; n=3; Bilateria|Rep... 46 3e-04
UniRef50_P38389 Cluster: Protein transport protein Sec61 subunit... 35 0.52
UniRef50_Q0JLV5 Cluster: Os01g0565900 protein; n=3; Magnoliophyt... 35 0.69
UniRef50_A4RRJ9 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 0.69
UniRef50_A2EC85 Cluster: Putative uncharacterized protein; n=1; ... 33 2.1
UniRef50_A6R5C2 Cluster: Predicted protein; n=4; Ascomycota|Rep:... 32 3.7
UniRef50_A7PTV2 Cluster: Chromosome chr7 scaffold_31, whole geno... 31 6.4
UniRef50_A7PR73 Cluster: Chromosome chr14 scaffold_26, whole gen... 31 6.4
UniRef50_A5C5T6 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
UniRef50_A3LUX9 Cluster: Predicted protein; n=2; Saccharomycetac... 31 8.5
>UniRef50_Q6DGH3 Cluster: Zgc:92922; n=13; Euteleostomi|Rep:
Zgc:92922 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 97
Score = 85.8 bits (203), Expect = 3e-16
Identities = 46/92 (50%), Positives = 52/92 (56%)
Frame = +1
Query: 91 SATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGGMWRFYTDDSX 270
SAT+VG+ SRSP+K A PRTA G+GGMWRFYT+DS
Sbjct: 7 SATNVGASSRSPSKTVA-PRTAGTSARQRKATSSSARSGGRSTASAGTGGMWRFYTEDSP 65
Query: 271 XXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
MSLLFIASVFMLHIWGKYTR+
Sbjct: 66 GLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 97
>UniRef50_P60468 Cluster: Protein transport protein Sec61 subunit
beta; n=31; Eukaryota|Rep: Protein transport protein
Sec61 subunit beta - Homo sapiens (Human)
Length = 96
Score = 84.2 bits (199), Expect = 9e-16
Identities = 45/94 (47%), Positives = 52/94 (55%)
Frame = +1
Query: 85 SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGGMWRFYTDD 264
+PS T+VGS RSP+KA A A+G G+GGMWRFYT+D
Sbjct: 5 TPSGTNVGSSGRSPSKAVAA--RAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTED 62
Query: 265 SXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
S MSLLFIASVFMLHIWGKYTR+
Sbjct: 63 SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>UniRef50_Q5BSB6 Cluster: SJCHGC05179 protein; n=3; Bilateria|Rep:
SJCHGC05179 protein - Schistosoma japonicum (Blood
fluke)
Length = 88
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1
Query: 250 FYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
FY++DS MSL FI SVF+LH WGKYTR+
Sbjct: 49 FYSEDSPGIKVGPVPVLVMSLCFIVSVFLLHFWGKYTRS 87
>UniRef50_P38389 Cluster: Protein transport protein Sec61 subunit
beta; n=13; Magnoliophyta|Rep: Protein transport protein
Sec61 subunit beta - Arabidopsis thaliana (Mouse-ear
cress)
Length = 82
Score = 35.1 bits (77), Expect = 0.52
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 232 SGGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGK 354
+G M +FYTDD+ MS+ FIA V +LH+ GK
Sbjct: 37 AGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGK 77
>UniRef50_Q0JLV5 Cluster: Os01g0565900 protein; n=3;
Magnoliophyta|Rep: Os01g0565900 protein - Oryza sativa
subsp. japonica (Rice)
Length = 80
Score = 34.7 bits (76), Expect = 0.69
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 229 GSGGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTR 363
G+ M +FYTD++ MS+ FIA V +LH++GK R
Sbjct: 33 GASTMLQFYTDEAAGRKMSPNSVLIMSIGFIAVVALLHVFGKLYR 77
>UniRef50_A4RRJ9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 76
Score = 34.7 bits (76), Expect = 0.69
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 229 GSGGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGK 354
GSG + RFYTD+S MS+ FI V MLH K
Sbjct: 25 GSGSLLRFYTDESPGLKITPVVVLGMSVCFIGFVTMLHAIAK 66
>UniRef50_A2EC85 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 848
Score = 33.1 bits (72), Expect = 2.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 126 G*STPRSYRGSTRRLRHFYSNVVKLYFKSDIH 31
G S P Y+ TR H+Y ++ K+YF DIH
Sbjct: 442 GESYPNRYKPGTRHDDHYYVSIDKIYFFPDIH 473
>UniRef50_A6R5C2 Cluster: Predicted protein; n=4; Ascomycota|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 285
Score = 32.3 bits (70), Expect = 3.7
Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 10/105 (9%)
Frame = +1
Query: 79 PQSPSATSVG-SGSR-----SPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGG 240
P+S S S G SGS SPT GPRTA G+GG
Sbjct: 179 PKSASGASSGISGSALHRPSSPTPPG-GPRTAMRRRAAADHKESIRNARPASTRSAGAGG 237
Query: 241 ----MWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTR 363
M + YTD+S +SL FI SV LH+ K +R
Sbjct: 238 SSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKISR 282
>UniRef50_A7PTV2 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 127
Score = 31.5 bits (68), Expect = 6.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTR 363
M FYTDD M+L FI V +LH++GK R
Sbjct: 80 MLLFYTDDDPGLKITPTVVLVMNLCFIGFVTVLHVFGKIYR 120
>UniRef50_A7PR73 Cluster: Chromosome chr14 scaffold_26, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_26, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 31.5 bits (68), Expect = 6.4
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +1
Query: 232 SGGMW----RFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTR 363
SG W RFYTDD+ SL FI V LH++G+ R
Sbjct: 28 SGNSWSNLLRFYTDDAPGLKITPMVVLVTSLCFIGFVVALHVFGEIYR 75
>UniRef50_A5C5T6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 422
Score = 31.1 bits (67), Expect = 8.5
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 229 GSGG--MWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTR 363
GS G + RFYTDD SL FI V LH++G+ R
Sbjct: 304 GSSGSNLLRFYTDDPPGLKITPMVVLVTSLCFIGFVIALHVFGEIYR 350
>UniRef50_A3LUX9 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 1113
Score = 31.1 bits (67), Expect = 8.5
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -3
Query: 148 VGQQKLLWVIYSQILQR*HSEIEAFLFKRCKTLL*VRYSLSTFSIY 11
V QQ + + S+ +QR ++ F R KTLL +RY L SIY
Sbjct: 894 VNQQNIFLALNSEKIQRFDELVQVFESIRDKTLLALRYDLRCKSIY 939
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,353,380
Number of Sequences: 1657284
Number of extensions: 5784424
Number of successful extensions: 13183
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13180
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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