Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31321
         (402 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25085-1|AAA19706.1|   96|Homo sapiens Sec61-complex beta-subuni...    84   1e-16
CR542159-1|CAG46956.1|   96|Homo sapiens SEC61B protein.               84   1e-16
CR456883-1|CAG33164.1|   96|Homo sapiens SEC61B protein.               84   1e-16
BC001734-1|AAH01734.1|   96|Homo sapiens Sec61 beta subunit prot...    84   1e-16
AL137067-2|CAC08000.1|   96|Homo sapiens Sec61 beta subunit prot...    84   1e-16
AK223384-1|BAD97104.1|   96|Homo sapiens protein translocation c...    81   1e-15
AF308287-1|AAG48255.1|  256|Homo sapiens serologically defined b...    29   7.7  

>L25085-1|AAA19706.1|   96|Homo sapiens Sec61-complex beta-subunit
           protein.
          Length = 96

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 45/94 (47%), Positives = 52/94 (55%)
 Frame = +1

Query: 85  SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGGMWRFYTDD 264
           +PS T+VGS  RSP+KA A    A+G                      G+GGMWRFYT+D
Sbjct: 5   TPSGTNVGSSGRSPSKAVAA--RAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTED 62

Query: 265 SXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
           S            MSLLFIASVFMLHIWGKYTR+
Sbjct: 63  SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96


>CR542159-1|CAG46956.1|   96|Homo sapiens SEC61B protein.
          Length = 96

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 45/94 (47%), Positives = 52/94 (55%)
 Frame = +1

Query: 85  SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGGMWRFYTDD 264
           +PS T+VGS  RSP+KA A    A+G                      G+GGMWRFYT+D
Sbjct: 5   TPSGTNVGSSGRSPSKAVAA--RAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTED 62

Query: 265 SXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
           S            MSLLFIASVFMLHIWGKYTR+
Sbjct: 63  SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96


>CR456883-1|CAG33164.1|   96|Homo sapiens SEC61B protein.
          Length = 96

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 45/94 (47%), Positives = 52/94 (55%)
 Frame = +1

Query: 85  SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGGMWRFYTDD 264
           +PS T+VGS  RSP+KA A    A+G                      G+GGMWRFYT+D
Sbjct: 5   TPSGTNVGSSGRSPSKAVAA--RAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTED 62

Query: 265 SXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
           S            MSLLFIASVFMLHIWGKYTR+
Sbjct: 63  SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96


>BC001734-1|AAH01734.1|   96|Homo sapiens Sec61 beta subunit
           protein.
          Length = 96

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 45/94 (47%), Positives = 52/94 (55%)
 Frame = +1

Query: 85  SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGGMWRFYTDD 264
           +PS T+VGS  RSP+KA A    A+G                      G+GGMWRFYT+D
Sbjct: 5   TPSGTNVGSSGRSPSKAVAA--RAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTED 62

Query: 265 SXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
           S            MSLLFIASVFMLHIWGKYTR+
Sbjct: 63  SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96


>AL137067-2|CAC08000.1|   96|Homo sapiens Sec61 beta subunit
           protein.
          Length = 96

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 45/94 (47%), Positives = 52/94 (55%)
 Frame = +1

Query: 85  SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGGMWRFYTDD 264
           +PS T+VGS  RSP+KA A    A+G                      G+GGMWRFYT+D
Sbjct: 5   TPSGTNVGSSGRSPSKAVAA--RAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTED 62

Query: 265 SXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
           S            MSLLFIASVFMLHIWGKYTR+
Sbjct: 63  SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96


>AK223384-1|BAD97104.1|   96|Homo sapiens protein translocation
           complex beta variant protein.
          Length = 96

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 44/94 (46%), Positives = 51/94 (54%)
 Frame = +1

Query: 85  SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXXGSGGMWRFYTDD 264
           +PS T+VGS  RSP+KA A    A+G                      G+G MWRFYT+D
Sbjct: 5   TPSGTNVGSSGRSPSKAVAA--RAAGSTVRQRKNAGCGTRSAGRTTSAGTGRMWRFYTED 62

Query: 265 SXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 366
           S            MSLLFIASVFMLHIWGKYTR+
Sbjct: 63  SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96


>AF308287-1|AAG48255.1|  256|Homo sapiens serologically defined
           breast cancer antigen NY-BR-20 protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 97  TSVGSGSRSPTKASAGPRTAS 159
           T  GSGS  PT +S GPR AS
Sbjct: 87  TERGSGSSKPTGSSGGPRMAS 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,635,801
Number of Sequences: 237096
Number of extensions: 928019
Number of successful extensions: 1653
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)