Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31320
         (611 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g22080.1 68418.m02571 DNAJ heat shock N-terminal domain-conta...    35   0.037
At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide...    28   4.2  
At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putat...    27   7.4  
At3g13180.1 68416.m01649 NOL1/NOP2/sun family protein / antiterm...    27   7.4  
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot...    27   9.8  

>At5g22080.1 68418.m02571 DNAJ heat shock N-terminal
           domain-containing protein similar to J-domain protein
           Jiv [Bos taurus] GI:15777193; contains Pfam profile
           PF00226 DnaJ domain
          Length = 246

 Score = 35.1 bits (77), Expect = 0.037
 Identities = 22/86 (25%), Positives = 42/86 (48%)
 Frame = +3

Query: 354 RREAYHSRASHTHIRCQQGGHTHIRCQQGGPTQRRRLRLQIRDHPLRQ*RRSRKLPLLVR 533
           +++     AS       +G H HI  +Q    Q+  L+L++R+    Q  R RK+ + + 
Sbjct: 114 KKQLKKDTASKIKSLVDEGKHEHIY-EQSEEFQKE-LKLKVREILTDQEWRRRKMAMRIS 171

Query: 534 DREQNSR*KNRQGRERWHRKRKHQGQ 611
           + E   +    + +E W +KR+H+ Q
Sbjct: 172 EEEGRLKKDEAEQKEIWKKKREHEEQ 197


>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
           identical to obtusifoliol 14-demethylase (GI:14624983)
           [Arabidopsis thaliana]
          Length = 488

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +1

Query: 34  ALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 204
           ++ A  GK        + +T   F  +      DP  YDP R + GR     +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422


>At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putative
           similar to SWISS-PROT:Q41364 2-oxoglutarate/malate
           translocator, chloroplast precursor [Spinach]{Spinacia
           oleracea}
          Length = 549

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 600 AFVFGANVLDLAGFFSENFVLGLVQVVV 517
           A  +GA  +DL   F   FV+ LVQ ++
Sbjct: 507 ALYYGAGYVDLRDMFRVGFVMALVQAII 534


>At3g13180.1 68416.m01649 NOL1/NOP2/sun family protein /
           antitermination NusB domain-containing protein low
           similarity to SP|P36929 SUN protein (FMU protein)
           {Escherichia coli}; contains Pfam profiles PF01189:
           NOL1/NOP2/sun family, PF01029: NusB family
          Length = 523

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 7   LAICLSLTVALAAETGKYTPFQYNRVYSTVSPF 105
           +A  LS  V L+AET K +P  + R   T  PF
Sbjct: 1   MAQLLSFRVYLSAETQKASPGSFKRTQKTRKPF 33


>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
           similar to pollen-specific BP10 protein
           [SP|Q00624][Brassica napus]; contains Pfam profile:
           PF00394 Multicopper oxidase
          Length = 551

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 13  ICLSLTVALAAETGKYTPFQYNRVYSTVSP 102
           +CL+ TVAL +    Y  + +N  Y T +P
Sbjct: 11  VCLASTVALVSAGDPYFYYTWNVTYGTAAP 40


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.312    0.133    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,539,406
Number of Sequences: 28952
Number of extensions: 211169
Number of successful extensions: 503
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)