Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31319
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 31 0.97
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 30 1.3
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 29 2.9
SB_25448| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_14410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29) 28 5.1
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 28 6.8
SB_23488| Best HMM Match : PSI_8 (HMM E-Value=5) 28 6.8
SB_35683| Best HMM Match : Amino_oxidase (HMM E-Value=0.0092) 28 6.8
SB_29619| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40) 27 9.0
SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6) 27 9.0
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 31.5 bits (68), Expect = 0.55
Identities = 24/63 (38%), Positives = 30/63 (47%)
Frame = +2
Query: 17 TSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTV 196
T R S H + + TT RR + AS T R SSNT+ + T RPS K+L T
Sbjct: 1113 TGRSSNTTRSHTRRSSNTTRGHTRRQVTQLASHT---RRSSNTTRRHTRRPS-KQLAVTQ 1168
Query: 197 AKQ 205
Q
Sbjct: 1169 GGQ 1171
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 30.7 bits (66), Expect = 0.97
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 56 KEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRR 235
KE+ + RR K+ S+ M R S ++ +R +KL VA T T GR+
Sbjct: 1127 KESTRSRAENRRRAKEEMSA--MERELEEASEQIKAREQ-EKLNKHVASVRTKIVTPGRK 1183
Query: 236 TPIYSKKT 259
TP+ K+T
Sbjct: 1184 TPVTPKRT 1191
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 14 ATSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICT 193
A R++TP T + + T C R ++ R H++NT SR T LIC+
Sbjct: 197 ALERIATPVTTSKLRCSTTQECCVRVDYRRKCCLHVWRVHTTNTYWSSLSRVGT-GLICS 255
Query: 194 VAKQSTLW 217
+ + + W
Sbjct: 256 IKQVNPRW 263
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = +2
Query: 20 SRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVA 199
SR +TP ++ + + TS T+R+T R +S TS K + T +
Sbjct: 135 SRTTTPTHRNISETGLRTSATSRKTFSNI-------RPTSETSRKTSGNSGTTTAVSLTI 187
Query: 200 KQSTLWATTGRRTPIYSKKTSSNS 271
S+ T RT I S + S +S
Sbjct: 188 SVSSRKLPTSTRTYIKSSEASRSS 211
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 29.1 bits (62), Expect = 2.9
Identities = 27/71 (38%), Positives = 37/71 (52%)
Frame = +2
Query: 68 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 247
TT T +TTK A++T +S T + TS ST K T++ ST ATT TP
Sbjct: 447 TTEATKSQTTK--ATTTL---STSTTKATTTSSTSTTKATTTLS-TSTTKATT---TPST 497
Query: 248 SKKTSSNSTSV 280
S ++ ST+V
Sbjct: 498 STTKATTSTAV 508
>SB_25448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 86 RRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYS 250
RR +K A S+ M S T++ S P + A + LW T RRT + S
Sbjct: 232 RRRSKALAPSSRMHAAHSMTAAGTASAPGPGEKSDHTALKFALWMTFERRTTVLS 286
>SB_14410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 86 RRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYS 250
RR +K A S+ M S T++ S P + A + LW T RRT + S
Sbjct: 132 RRRSKALAPSSRMHAAHSMTAAGTASAPGPGEKSDHTALKFALWMTFERRTTVLS 186
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +2
Query: 68 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 247
TTS T +T ++ST ++NTS+ TS P T T A ++ + + R P
Sbjct: 11 TTSITTSTSTP--STSTPRAGSTTNTSAPSTSTPRTGSTTTTSAPSTSTTSNSTTRAPST 68
Query: 248 SKKTSSNSTS 277
S + ++T+
Sbjct: 69 STPRAGSTTT 78
Score = 27.5 bits (58), Expect = 9.0
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 14 ATSRLSTPFTIHLPKEAMTTSCTARRT-TKKFASSTFMRRHS-SNTSSKVTSRPSTKK-- 181
+T+ S P T P+ TT+ +A T T + S+T S S TS+ T PST
Sbjct: 75 STTTTSAPST-STPRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPR 133
Query: 182 --LICTVAKQSTLWATTGRRTPIYSKKTSSNSTS 277
T+ +T TT T S+ S+ +TS
Sbjct: 134 TGSTITLRTSTTSVMTTTPSTTSISRAGSTTTTS 167
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/75 (28%), Positives = 30/75 (40%)
Frame = +2
Query: 17 TSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTV 196
T+ P TI E TT T TT ++T + ++ T P+T I T
Sbjct: 16 TTTTEEPTTI---TETTTTKTTEEPTTITETTTTTEEPTTITETTTTTEEPTTITEITTT 72
Query: 197 AKQSTLWATTGRRTP 241
++ T TT TP
Sbjct: 73 TEEPTTTTTTAAETP 87
>SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 122 MRRHSSNTSSKVTSRPSTKK-LICTVAKQSTLWATTGRRTPIYSKKTSSNSTS 277
+R+ S N S K ++CT+ K T RT SK ++ NSTS
Sbjct: 2196 LRKCSENVSRKAQEHCRVAPYMVCTLTKSCRYQTATRTRTVRLSKASNENSTS 2248
>SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29)
Length = 294
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 232 TNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTSARDPAFYQ 402
T AD+F +D FYQ+S + ++ +PK SA Y S + P+ YQ
Sbjct: 54 TRADMFYQDPFLFYQQSPHYSPHNIVPPSPKYSPHLMGDCSAQSAYFVS-KQPSHYQ 109
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 28.3 bits (60), Expect = 5.1
Identities = 29/87 (33%), Positives = 38/87 (43%)
Frame = +2
Query: 17 TSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTV 196
TS STP TTS T +T + S+T +S TS+ TS ST T
Sbjct: 18 TSYTSTPSYTSTTSYTSTTSYT---STSSYTSTTSYTSTTSYTST--TSYTSTPSYTSTT 72
Query: 197 AKQSTLWATTGRRTPIYSKKTSSNSTS 277
+ ST T+ T Y+ TS ST+
Sbjct: 73 SYTST---TSYTSTTSYTSTTSYTSTT 96
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +2
Query: 68 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 247
TTS + ++ ++T + TSS V P+T ++ + + S++ T+ TP+
Sbjct: 443 TTSTPSLESSMTSNNTTLTLAEAVATSSPVL--PTTTSVLTSSMEPSSMATTSTTSTPLE 500
Query: 248 SKKTSSNSTS 277
S T++++TS
Sbjct: 501 SSMTTNSTTS 510
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 74 SCTARRTTKKFASSTFMRRHSSNTSSKVTSRPST 175
S +R KF+S+T+ R+ S+ S VTS+ T
Sbjct: 2937 SADSRNKIDKFSSTTYSRKKESSGKSDVTSKTVT 2970
>SB_23488| Best HMM Match : PSI_8 (HMM E-Value=5)
Length = 192
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 223 YWQTNADLFEEDFLQFYQRSYEVNARRVLGA--APKPFNQYTFIPSALDFYQTSA 381
Y T L ++ LQFY + Y + PK + QYTF + + Y +SA
Sbjct: 93 YIPTCVQLRHKNLLQFYVKKYVACLMFATSSDFCPKEYEQYTFADTWIASYLSSA 147
>SB_35683| Best HMM Match : Amino_oxidase (HMM E-Value=0.0092)
Length = 729
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 208 NFVGNYWQTNADLFEEDFLQFYQRSYEVNA-RRVLGAAPKPFNQYT 342
N G WQ+ ADL + F R ++N +++L A K +Y+
Sbjct: 249 NGTGGIWQSVADLLPRSWFHFENRVVQLNIDKKILTVASKDGAKYS 294
>SB_29619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 145 LQQGHFKAFDKEIDLHSSKAVNFVGNYWQTNADL--FEEDFLQFYQ-RSYEVNARRVLGA 315
LQQ F F +++ KA+ F G W +++ + FYQ + E+ R+
Sbjct: 526 LQQTKFSRFKNSMNVKFGKALKFTGKLWNVGSEVANIAGAAMMFYQIINTEMVCRKRAEE 585
Query: 316 APKPFNQYT 342
A K ++ T
Sbjct: 586 AKKALDEIT 594
>SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40)
Length = 2057
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 463 QEALHFVGLKISDVKVDKMGTFFDHFDFDAFNTVYFSKEELKSS 594
QE F+ +K+SD ++ FDFD+ + V +KE K S
Sbjct: 640 QENEEFLDIKVSDESLETPQFQVTRFDFDSNSEVEKNKESSKRS 683
>SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6)
Length = 325
Score = 27.5 bits (58), Expect = 9.0
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Frame = +2
Query: 17 TSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKK----- 181
T TP TI PK T+ T K ST + ++ T T++PST +
Sbjct: 171 TKAPKTPITI--PKTTTNRPQTSTITAKITTESTTATQATTKTKEYTTNKPSTTEESTTN 228
Query: 182 LICTVAKQSTLWATTGRRTPIYSKKTSSNS 271
T +ST A +T Y+ K S +
Sbjct: 229 EASTAEFESTTAAQATTKTEAYTTKKPSTT 258
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,831,857
Number of Sequences: 59808
Number of extensions: 322793
Number of successful extensions: 1069
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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