Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31316
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   156   2e-40
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.7  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   5.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  156 bits (378), Expect = 2e-40
 Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 1/187 (0%)
 Frame = +1

Query: 13  DEYEHFWKEYSTNIKLGVMEDPSNRSRLAKLLRFHSSHS-EEKTFLSDYVKRMKPKQHHI 189
           D Y+ F++++S NIKLG+ ED  NR++L++LLR+H+S S +E   L DYV R+KP Q HI
Sbjct: 421 DGYKKFYEQFSKNIKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKDYVSRIKPNQKHI 480

Query: 190 YYIAGSSRAEVEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAKEIFDL 369
           YYI G S+ +V  S F ER+  RG+EV+Y+TE +DEY +  + E+DG    ++ KE  +L
Sbjct: 481 YYITGESKEQVANSSFVERVKKRGFEVVYMTEPIDEYVVQQMKEFDGKTLVSVTKEGLEL 540

Query: 370 EEGDRAKEKLEAYKKQYEPLTRWLGDKLGSWITRATVXXXXXXXXXXXXXXXFGWTGNME 549
            E +  K+K E  K ++E L + +   L + + +  V               +GWT NME
Sbjct: 541 PEDEEEKKKREEDKAKFEGLCKVMKSILDNKVEKVVVSNRLVESPCCITMRRYGWTANME 600

Query: 550 RLALSNA 570
           R+  + A
Sbjct: 601 RIMKAQA 607


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 134 SSEWEEWNRSSLARRERLLGSSITPSLMLVEYSFQ 30
           ++ W E  +  L +RERL+   I    +  E+ +Q
Sbjct: 551 TNTWREAEQRILVQRERLISLGINSDALEPEWCWQ 585


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 96   KTGAVAGIFHHPELDV 49
            +TG VA +++HPE +V
Sbjct: 1599 QTGHVAPLYYHPEDEV 1614


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 589 PQRRHHLTQKEDAGDQPAPP 648
           PQ    +TQK  +   PAPP
Sbjct: 394 PQPVEEVTQKPSSTKAPAPP 413


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 48  QHQ-ARGDGRSQQPLPSCQAAAVPLFPLGGE 137
           QH+    D ++  PLPS +  AVP+    G+
Sbjct: 99  QHEKGMHDQQNNNPLPSPRRVAVPVLVRDGK 129


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 147 VRLREAHEAQATPHLLHRGLQPR 215
           + L   H+ + T HL+  G +PR
Sbjct: 144 IMLNSLHKYKPTVHLVRVGTEPR 166


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 306 EAVLVHGLGEVQHLVAA 256
           + +LV+G G  +H V A
Sbjct: 244 DTILVNGFGRFKHFVGA 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.132    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,897
Number of Sequences: 336
Number of extensions: 2163
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)