Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31316
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 136 4e-33
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 30 0.38
SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr... 27 2.0
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 27 2.7
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 27 3.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 4.7
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 26 6.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 6.1
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 136 bits (328), Expect = 4e-33
Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Frame = +1
Query: 13 DEYEHFWKEYSTNIKLGVMEDPSNRSRLAKLLRFHSSHSEEKTF-LSDYVKRMKPKQHHI 189
+ ++ F+ +S N+KLG+ ED +NR LAKLLR++S +S + L DY+ +M Q +I
Sbjct: 407 ENFKTFYDAFSKNLKLGIHEDAANRPALAKLLRYNSLNSPDDLISLEDYITKMPEHQKNI 466
Query: 190 YYIAGSSRAEVEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAKEIFDL 369
Y+I G S+ VE SPF E ++ ++VL++ + +DEY ++ L E++G K NI K+ +L
Sbjct: 467 YFITGESKQAVENSPFLEIFRAKKFDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLEL 526
Query: 370 EEGDRAKEKLEAYKKQYEPLTRWLGDKLGSWITRATVXXXXXXXXXXXXXXXFGWTGNME 549
EE D K E +K+YE + L LG + + V +GW+ NME
Sbjct: 527 EETDEEKAAREKLEKEYEEFAKQLKTILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANME 586
Query: 550 RLALSNA 570
R+ + A
Sbjct: 587 RIMKAQA 593
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 29.9 bits (64), Expect = 0.38
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = +1
Query: 19 YEHFWKEYSTNIKLGVMEDPSNRSRLAKLLRFHSSHSEEKTFLSDYVKRMKP 174
+E+ + ++++N K+ ++ R ++ HSS +++ T+L KR P
Sbjct: 603 FENHFSDFNSNRKVSPVKREVRRKYISSATTIHSSAAQDDTYLPSPTKRKMP 654
>SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 808
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 181 HHIYYIAGSSRAEVEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYD 327
H + G + E EK E + R E + E V YC SS+ EYD
Sbjct: 609 HFVAEFLGETE-EAEKLAGYENAMLRNLEDNHWDEEVQAYCDSSVDEYD 656
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 232 ATSPPQRGWSPRCSRCGVAWASCASRSLTGRSS 134
A PP R W +C CG ++ C S +G +S
Sbjct: 953 AQLPPNR-WEKKCEVCGNSFGVCVSSPNSGLTS 984
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 316 PEYDGHKFQNIAKEIFDLEEGDRAKEKLEAYKKQYEPL 429
P+Y+G+ ++ K++ +E+++ YKK YEPL
Sbjct: 283 PDYEGYDTESALKDL---------RERVDLYKKYYEPL 311
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 178 AWASCASRSLTGRSSPPSGKSGTAAAWQDGSGCWDLPSPR 59
A +S ++S T SSPP S T+ + S PSP+
Sbjct: 464 AKSSEEAKSTTNDSSPPKDSSSTSTQPTEQSNAQQAPSPK 503
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 574 QKADDPQRRHHLTQKEDAGDQPAP 645
+K D R+H T++ED G P P
Sbjct: 740 KKKDREHRKHRETEEEDEGPPPQP 763
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 415 QYEPLTRWLGDKLGSWITRAT 477
Q E RWLG +LG W+ T
Sbjct: 289 QTEKGVRWLGKRLGEWLLDIT 309
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 6.1
Identities = 30/121 (24%), Positives = 53/121 (43%)
Frame = +1
Query: 67 MEDPSNRSRLAKLLRFHSSHSEEKTFLSDYVKRMKPKQHHIYYIAGSSRAEVEKSPFAER 246
+E + R+A+L S+ ++K S+ M + H + E E S E+
Sbjct: 952 LERTKEKLRMAEL---EKSNIQQKYLASEKTLEMMNETHEQF----KHLVESEISTREEK 1004
Query: 247 LVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAKEIFDLEEGDRAKEKLEAYKKQYEP 426
+ S E+L L + V+ L E + +AK+ LE+ R K+ ++KK YE
Sbjct: 1005 ITSLRSELLDLNKRVEV-----LKEEKESSSKELAKQ---LEDAVREKDSALSFKKDYEK 1056
Query: 427 L 429
+
Sbjct: 1057 I 1057
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.132 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,139,064
Number of Sequences: 5004
Number of extensions: 38129
Number of successful extensions: 152
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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