Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31316
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 230 1e-60
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0) 156 2e-38
SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37) 29 4.9
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_3581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 28 6.5
SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_1179| Best HMM Match : IQ (HMM E-Value=1e-04) 28 8.6
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 28 8.6
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 230 bits (562), Expect = 1e-60
Identities = 114/220 (51%), Positives = 150/220 (68%), Gaps = 4/220 (1%)
Frame = +1
Query: 1 KIPDDEY-EHFWKEYSTNIKLGVMEDPSNRSRLAKLLRFHSSHSE-EKTFLSDYVKRMKP 174
KIP ++Y FWKEYSTNIKLGV+ED SNR+RLAKLLRF+SS+SE + T L++Y++RMK
Sbjct: 458 KIPKEDYMATFWKEYSTNIKLGVIEDHSNRTRLAKLLRFYSSNSEKDMTSLAEYIERMKE 517
Query: 175 KQHHIYYIAGSSRAEVEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAK 354
KQ IY++AG +R EVE SPF E+L+ GYEVLYL E VDEYC+ SLPE++G KFQN+AK
Sbjct: 518 KQDVIYFMAGHNRKEVESSPFVEKLLKEGYEVLYLIEPVDEYCMQSLPEFEGKKFQNVAK 577
Query: 355 EIFDL-EEGDRAKEKLEAYKKQYEPLTRWL-GDKLGSWITRATVXXXXXXXXXXXXXXXF 528
E + E+ D+ K+K E +K YEPL +WL D L I +AT+ +
Sbjct: 578 EGLKIGEDSDKKKKKFEELEKTYEPLLKWLKEDALKDQIEKATISERLHDSPCALVASSY 637
Query: 529 GWTGNMERLALSNAHQKADDPQRRHHLTQKEDAGDQPAPP 648
GW+GNMER+ S A+ K+ DP ++ TQK+ P P
Sbjct: 638 GWSGNMERIMRSQAYAKSSDPSNEYYATQKKTLEVNPRHP 677
>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 581
Score = 156 bits (378), Expect = 2e-38
Identities = 79/187 (42%), Positives = 109/187 (58%), Gaps = 1/187 (0%)
Frame = +1
Query: 13 DEYEHFWKEYSTNIKLGVMEDPSNRSRLAKLLRFHSSHS-EEKTFLSDYVKRMKPKQHHI 189
D Y+ F++++ N+KLG+ ED NR++LA LLR+HSS S +E T L DYV RMK Q I
Sbjct: 363 DNYKKFYEQFGKNLKLGIHEDSVNRAKLADLLRYHSSSSGDELTSLKDYVTRMKENQKDI 422
Query: 190 YYIAGSSRAEVEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAKEIFDL 369
Y+I G S+ +V S F ER+ SRG+EVLY+ E +DEY + L EYDG K ++ KE +L
Sbjct: 423 YFITGESKDQVSHSAFVERVKSRGFEVLYMVEPIDEYAIQQLKEYDGKKLVSVTKEGLEL 482
Query: 370 EEGDRAKEKLEAYKKQYEPLTRWLGDKLGSWITRATVXXXXXXXXXXXXXXXFGWTGNME 549
E + K+ E +YE L + + D L I + V FGWT NME
Sbjct: 483 PEDEDEKKAREEKVAKYEGLCKVIKDILDKKIEKVVVSSRLVSSPCCIVTSQFGWTANME 542
Query: 550 RLALSNA 570
R+ + A
Sbjct: 543 RIMKAQA 549
>SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37)
Length = 1147
Score = 28.7 bits (61), Expect = 4.9
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +1
Query: 10 DDEYEHFWKEYSTN-IKLGVMEDPSN--RSRLAKLLRFHSSHSEEKTFLSDYVKRMKPKQ 180
D E+E++WKE ST I LG+ D N +SR + + + + D K+ + +
Sbjct: 516 DVEFENYWKEISTALIALGISSDEVNDLKSRPSGATDYIALLQKWNEDELDLFKKTQEVR 575
Query: 181 HHIYYIAGSSRAEVEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYD--GHKFQNIAK 354
+ + S + K ++ G +V + + V+ S ++ H+ Q I +
Sbjct: 576 KEVQGV--SHEVQDLKQAMNSQIQGVGADVQSVQQKVEGVGQSVNEKFHVIAHEVQTIRQ 633
Query: 355 EIFDLEE---GDRAKEKLEAYKKQYEPLTRW 438
EI ++++ G E E K+ E W
Sbjct: 634 EIQEIKDGKIGQGVAESDELAKRDKERFKDW 664
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 205 SPRCSRCGVAWASCASRSLTGRSSPPSGKSGTAAAWQDGSGCWD 74
+P RC + A S+ G + P+G T A GC+D
Sbjct: 1935 TPLTDRCYITLAQALGMSMGGAPAGPAGTGKTGLAQSGSWGCFD 1978
>SB_3581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 220 VEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIA---KEIFDLEEGDRAK 390
V K E L S Y V Y T CL + DG F N K++FD E+G+
Sbjct: 95 VNKEILFEWLFSYAYYVDYCTRG----CLLPRMDTDGMAFDNFGSAMKDLFDFEDGEEET 150
Query: 391 E 393
E
Sbjct: 151 E 151
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3
Query: 244 ARRTATSPPQRGWSPRCSRCGVAWASCASRSLTGRSSPPS 125
+R +SP Q+ SPR R V S SR +G S PPS
Sbjct: 1911 SRSRPSSPGQQDQSPRPGRSRVNSPSRDSRRSSGGSRPPS 1950
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +1
Query: 79 SNRSRLAKLLRFHSSHSEEKTFLSDYVKRMKPKQHHIYYIAGSSRAEVEKSPFAERLVSR 258
SN S+ A LL+ + + +Y+ M ++ Y + SSR + + ++ +SR
Sbjct: 467 SNNSKCAGLLKPQENSKQRSKPKHNYI--MSDVEYEDYGSSCSSRTQTYRQNLLQQPISR 524
Query: 259 GYEVLYLTEAVDE 297
E L L VD+
Sbjct: 525 SLECLPLRPVVDQ 537
>SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 325 DGHKFQNIAKEIFDLEEGDRAKEKLEAYKKQYEPLTRWLGDKL 453
D + N ++I D ++ +AKE+LE+ K+ YE L L ++L
Sbjct: 114 DYDSWSNKMEKIKDKDKLKQAKEELESAKRNYEALNAQLLEEL 156
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.9 bits (59), Expect = 8.6
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Frame = +1
Query: 70 EDPSNRSRLAKLLRFHSSHSEEKTFLSDYVKRMKPKQHHIYYIAGSSRAEVEKSPFAERL 249
++ S + + K L S S+ +T SDY R+K K+ + G EK +A+ L
Sbjct: 521 QEVSQKDKQLKALE-ESKESDIRTLSSDYDNRLKDKEREVVDFKGKF---TEKEYYAKEL 576
Query: 250 VSRGYEV-------LYLTEAVDEYCLSSLPE-YDGHKFQNIAKEIFDLEEGDR-AKEKLE 402
+ E+ L +T+ E + S+ E K + + + E G++ A + E
Sbjct: 577 EKKLLELREETDKKLEVTKKEAEIKVQSVEEQLSSQKAEELLVMQSERELGEKAAMAQCE 636
Query: 403 AYKKQYEPLTRWL 441
YKK+ L L
Sbjct: 637 EYKKKNNELNEAL 649
>SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -1
Query: 78 GIFHHPELDVGGVLLPEVFVFI-VRN 4
G+ +H E D+ L+P+ FVF+ VRN
Sbjct: 712 GVMNHKETDLFNGLIPQCFVFVMVRN 737
>SB_1179| Best HMM Match : IQ (HMM E-Value=1e-04)
Length = 474
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 217 EVEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAKEI-FDLEEGDRAKE 393
EV+K +E + R + +L + + E + + +G + A+ + F ++E +R
Sbjct: 232 EVKKEKESE-IQQRNEMIAHLKDQLQE--MKAKTSMEGKYIKKDAERLKFKIDEEERVNN 288
Query: 394 KLEAYKKQYEPLTRWLGDKLGSWITR 471
++EAY KQ+ + L +K+ W+ +
Sbjct: 289 EIEAYLKQHHQI---LEEKVEYWMEK 311
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 205 SPRCSRCGVAWASCASRSLTGRSSPPSGKSGTAAAWQDGSGCWD 74
+P RC + A S+ G + P+G T A GC+D
Sbjct: 1941 TPLTDRCYITLAQALFMSMGGAPAGPAGTGKTGLAQSGSWGCFD 1984
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.132 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,994,106
Number of Sequences: 59808
Number of extensions: 320189
Number of successful extensions: 1270
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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