Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31315
         (356 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6NZR7 Cluster: Putative uncharacterized protein; n=1; ...    33   1.1  
UniRef50_A5UK58 Cluster: Putative uncharacterized protein; n=1; ...    33   1.5  
UniRef50_A5TRI2 Cluster: Sensor protein; n=1; Fusobacterium nucl...    31   7.7  
UniRef50_A5KLJ4 Cluster: Putative uncharacterized protein; n=3; ...    31   7.7  
UniRef50_Q4GYE3 Cluster: Putative uncharacterized protein; n=1; ...    31   7.7  

>UniRef50_A6NZR7 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 463

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +3

Query: 138 LFYISHFYYYNLRVSL--PSNHVSHFNYIDFIFFGSD*ASVTSKSIL*SFSRDTDHENDI 311
           LF++ H   Y L   L  P NH+SH  Y+ +   G    +V + ++L   SR  + E+ +
Sbjct: 153 LFFVFHLGMYLLLSFLFRPKNHLSHGRYVSWGVGGISVFTVLTINVLICVSRVYEQESWV 212

Query: 312 KSIVMKRPC 338
            +IV+K  C
Sbjct: 213 LNIVVKVFC 221


>UniRef50_A5UK58 Cluster: Putative uncharacterized protein; n=1;
           Methanobrevibacter smithii ATCC 35061|Rep: Putative
           uncharacterized protein - Methanobrevibacter smithii
           (strain PS / ATCC 35061 / DSM 861)
          Length = 400

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +3

Query: 180 SLPSNHVSHFNYIDFIFFGSD*ASVTSKSIL*SFSRDTDHEN 305
           S+ + +V  FNY   I F  + A +TS+SIL +  RD   EN
Sbjct: 30  SVETEYVELFNYTQTILFELEKAEITSESILENLKRDVGVEN 71


>UniRef50_A5TRI2 Cluster: Sensor protein; n=1; Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953|Rep: Sensor
           protein - Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953
          Length = 623

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = +3

Query: 96  LYKRIL*SDGFIQFLFYISHFYYYNLRVSLPSNHVSHFNYIDFIFF 233
           ++K+I   + F+ F+F +   Y++N+ +SL  N++  F    F+FF
Sbjct: 3   IHKKITIINIFLIFIFVVLFIYFFNIEISL--NNLLKFLLFIFLFF 46


>UniRef50_A5KLJ4 Cluster: Putative uncharacterized protein; n=3;
           Clostridiales|Rep: Putative uncharacterized protein -
           Ruminococcus torques ATCC 27756
          Length = 177

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 44  INCHFFAFCVNN-YRFRYFIQTYFVKRWIYTVFI 142
           I  +FF F +N+ +RF Y++    V   IYT+ I
Sbjct: 117 ITIYFFTFLLNSDFRFTYYLNRIIVPEMIYTIVI 150


>UniRef50_Q4GYE3 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 128

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 126 FIQFLFYISHFYYYNLRVSLPSNHVSHFNYIDFIFF 233
           F+ F+FY S F YY+   +       +F++  F+FF
Sbjct: 46  FLSFIFYFSVFAYYSFNFNFNFVVRPYFHWFSFLFF 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,711,085
Number of Sequences: 1657284
Number of extensions: 5127017
Number of successful extensions: 11674
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11650
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)