Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31315
         (356 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0083 + 16374830-16374922,16375917-16375974,16377893-163780...    28   2.5  
03_01_0206 - 1625020-1625619,1625722-1625931,1626054-1626094,162...    27   5.7  
04_03_0652 - 18424489-18424525,18424639-18424702,18424796-184248...    26   7.6  
02_05_0709 - 31111834-31111887,31111910-31112134                       26   7.6  
02_03_0212 - 16460665-16460766,16460971-16461298,16461379-164615...    26   7.6  
01_07_0309 - 42655890-42656001,42656241-42656332,42656493-426565...    26   7.6  

>06_03_0083 +
           16374830-16374922,16375917-16375974,16377893-16378089,
           16378176-16378292,16378437-16378497,16378603-16378691,
           16378808-16378882,16378992-16379080,16379203-16379252,
           16379539-16379699,16380004-16380132,16380548-16380928
          Length = 499

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 8   VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKR 121
           ++ KK KK     N   + F ++  RFR+  QT FVKR
Sbjct: 154 LKMKKWKKWESQTNSLEYQFAIDPSRFRFTHQTSFVKR 191


>03_01_0206 -
           1625020-1625619,1625722-1625931,1626054-1626094,
           1626185-1626234,1626345-1626433,1626534-1626608,
           1626721-1626806,1626896-1626956,1627090-1627206,
           1627308-1627549,1627983-1628040,1628162-1628284
          Length = 583

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 8   VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKR 121
           ++ KK KK  +  N   + F  +  RFR+  QT FVKR
Sbjct: 179 LKMKKWKKWELETNSLEYQFANDPSRFRFTHQTSFVKR 216


>04_03_0652 -
           18424489-18424525,18424639-18424702,18424796-18424869,
           18425809-18425924,18426078-18426343,18427659-18427749
          Length = 215

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 6/28 (21%)
 Frame = +3

Query: 123 GFIQFLFYISHFYYY------NLRVSLP 188
           GF+Q L Y   FYYY      N++++LP
Sbjct: 187 GFVQTLLYADFFYYYLNSLKNNVKLTLP 214


>02_05_0709 - 31111834-31111887,31111910-31112134
          Length = 92

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 5  GVRFKKEKKTVVFINCHFFAFC 70
          G   K E+ TV+F +C FF  C
Sbjct: 19 GAILKDERGTVIFSSCRFFERC 40


>02_03_0212 -
           16460665-16460766,16460971-16461298,16461379-16461502,
           16461576-16461825,16462185-16462265,16463030-16463114,
           16463200-16463321,16463865-16464672,16464775-16465027,
           16465998-16466796
          Length = 983

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 5   GVRFKKEKKTVVFINCHFFA 64
           G+R +   +++ F+NCHF A
Sbjct: 693 GLRMRIHDRSICFVNCHFAA 712


>01_07_0309 -
          42655890-42656001,42656241-42656332,42656493-42656500,
          42658146-42658209,42658408-42658473,42658479-42658571
          Length = 144

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 31 NCSFYKLSFFCILCK*LSFSVL 96
          N +F ++ F C LCK + FS+L
Sbjct: 25 NANFLQMFFLCKLCKFVVFSIL 46


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,504,644
Number of Sequences: 37544
Number of extensions: 114047
Number of successful extensions: 160
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)