Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31315
         (356 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ141696-1|AAZ73087.1|  674|Homo sapiens NDC1 protein.                 28   7.4  
BC003082-1|AAH03082.1|  674|Homo sapiens transmembrane protein 4...    28   7.4  
AL354613-1|CAB89726.1|  673|Homo sapiens hypothetical protein pr...    28   7.4  
AL354612-1|CAB89725.1|  542|Homo sapiens hypothetical protein pr...    28   7.4  
AL049745-2|CAI22180.1|  674|Homo sapiens transmembrane protein 4...    28   7.4  
AK001269-1|BAA91592.1|  674|Homo sapiens protein ( Homo sapiens ...    28   7.4  

>DQ141696-1|AAZ73087.1|  674|Homo sapiens NDC1 protein.
          Length = 674

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 8   VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKRWIYTVFILY 148
           +RF++    +V  +C    F V N+   Y+   Y  K WI T   L+
Sbjct: 203 LRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLH 249


>BC003082-1|AAH03082.1|  674|Homo sapiens transmembrane protein 48
           protein.
          Length = 674

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 8   VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKRWIYTVFILY 148
           +RF++    +V  +C    F V N+   Y+   Y  K WI T   L+
Sbjct: 203 LRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLH 249


>AL354613-1|CAB89726.1|  673|Homo sapiens hypothetical protein
           protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 8   VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKRWIYTVFILY 148
           +RF++    +V  +C    F V N+   Y+   Y  K WI T   L+
Sbjct: 202 LRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLH 248


>AL354612-1|CAB89725.1|  542|Homo sapiens hypothetical protein
           protein.
          Length = 542

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 8   VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKRWIYTVFILY 148
           +RF++    +V  +C    F V N+   Y+   Y  K WI T   L+
Sbjct: 203 LRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLH 249


>AL049745-2|CAI22180.1|  674|Homo sapiens transmembrane protein 48
           protein.
          Length = 674

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 8   VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKRWIYTVFILY 148
           +RF++    +V  +C    F V N+   Y+   Y  K WI T   L+
Sbjct: 203 LRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLH 249


>AK001269-1|BAA91592.1|  674|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10407 fis, clone NT2RM4000520. ).
          Length = 674

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 8   VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKRWIYTVFILY 148
           +RF++    +V  +C    F V N+   Y+   Y  K WI T   L+
Sbjct: 203 LRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLH 249


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,176,169
Number of Sequences: 237096
Number of extensions: 689481
Number of successful extensions: 1048
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)