Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31314
(591 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 152 2e-37
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 152 2e-37
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 127 8e-30
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 31 0.52
07_03_1414 - 26403361-26403969 31 0.52
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 0.69
07_03_1422 + 26462871-26463434,26463772-26463897 30 1.2
07_03_1413 - 26396426-26396890 30 1.2
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 30 1.2
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 29 3.7
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 28 4.8
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 152 bits (368), Expect = 2e-37
Identities = 75/141 (53%), Positives = 93/141 (65%)
Frame = +3
Query: 159 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 338
NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81
Query: 339 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 518
K A LFK+L KYRPE +P ++ G N VT L+E
Sbjct: 82 KNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 140
Query: 519 KKKAQLVVIAHDVDPIELVLF 581
+ KAQLVVIAHDVDPIELV++
Sbjct: 141 QSKAQLVVIAHDVDPIELVVW 161
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 152 bits (368), Expect = 2e-37
Identities = 75/141 (53%), Positives = 93/141 (65%)
Frame = +3
Query: 159 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 338
NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65
Query: 339 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 518
K A LFK+L KYRPE +P ++ G N VT L+E
Sbjct: 66 KNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 124
Query: 519 KKKAQLVVIAHDVDPIELVLF 581
+ KAQLVVIAHDVDPIELV++
Sbjct: 125 QSKAQLVVIAHDVDPIELVVW 145
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 127 bits (306), Expect = 8e-30
Identities = 68/141 (48%), Positives = 89/141 (63%)
Frame = +3
Query: 159 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 338
NPLFEKRPK F IG + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLD
Sbjct: 23 NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLD 82
Query: 339 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 518
K ++L++ + E +P ++ G + VT L+E
Sbjct: 83 KNLGCQKERLLKRAQAEA-----------------EGKTVEAKKPIVVKYGLDHVTYLIE 125
Query: 519 KKKAQLVVIAHDVDPIELVLF 581
+ KAQLVVIAHDVDPIELV++
Sbjct: 126 QSKAQLVVIAHDVDPIELVVW 146
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 31.5 bits (68), Expect = 0.52
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 480 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVL 578
++ G N TK + + A+ VV+A D +P+E++L
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILL 65
>07_03_1414 - 26403361-26403969
Length = 202
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 269 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 129
AL A + P + G++ + + +T G+ L P LEE + GL L+D
Sbjct: 76 ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 257 PHPAPEGCTSASSESAPSDQP 319
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>07_03_1422 + 26462871-26463434,26463772-26463897
Length = 229
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 269 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 129
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 74 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120
>07_03_1413 - 26396426-26396890
Length = 154
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 269 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 129
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 28 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 480 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVL 578
++ G N TK + + ++ VV+A D +P+E++L
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILL 67
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 443 QER*ASTKEAQYHPIRHKHSHQAGREEESAACGHR 547
QER A + + H RH H H A + ++ GHR
Sbjct: 685 QER-ARRRHKRAHSHRHSHHHDAHKRHKTELAGHR 718
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 204 PDQWQSSLASSRREDSRSSWAQPF*PPMGRR 112
P SSLA +RR +R AQP PP RR
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARR 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,714,655
Number of Sequences: 37544
Number of extensions: 291407
Number of successful extensions: 958
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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