Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31313
(612 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q73MN6 Cluster: Flagellar hook-associated protein 2; n=... 42 0.012
UniRef50_A3DKN0 Cluster: SMC domain protein; n=1; Staphylothermu... 36 1.0
UniRef50_A2FCP8 Cluster: Zinc finger, C2H2 type family protein; ... 35 1.3
UniRef50_A6RNP2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q83AR5 Cluster: Primosomal protein N'; n=3; Coxiella bu... 34 3.1
UniRef50_A6DDV9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q6K2S9 Cluster: Putative uncharacterized protein OSJNBa... 34 3.1
UniRef50_UPI0000D5659A Cluster: PREDICTED: similar to CG31716-PA... 33 4.0
UniRef50_A0UYD4 Cluster: Methionine--tRNA ligase; n=4; Clostridi... 33 4.0
UniRef50_A0LP34 Cluster: ErfK/YbiS/YcfS/YnhG family protein; n=1... 33 4.0
UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmo... 33 4.0
UniRef50_A2DYD5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.3
UniRef50_Q4HM05 Cluster: Periplasmic protein Cj0111; n=1; Campyl... 33 7.1
UniRef50_Q21GW8 Cluster: Regulatory protein, LysR; n=8; Proteoba... 33 7.1
UniRef50_Q0STB3 Cluster: Amino acid ABC transporter; n=3; Clostr... 33 7.1
UniRef50_A6GQ32 Cluster: Probable methyltransferase; n=1; Limnob... 33 7.1
UniRef50_O83842 Cluster: Flagellar hook-associated protein 2; n=... 33 7.1
UniRef50_UPI00015B5D72 Cluster: PREDICTED: similar to viral A-ty... 32 9.3
UniRef50_A7ADK3 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_A0KGT3 Cluster: Chemotaxis sensory transducer family pr... 32 9.3
>UniRef50_Q73MN6 Cluster: Flagellar hook-associated protein 2; n=1;
Treponema denticola|Rep: Flagellar hook-associated
protein 2 - Treponema denticola
Length = 652
Score = 41.9 bits (94), Expect = 0.012
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -1
Query: 363 TIFANGTSEKTDFKLDAKPTASAVEATLIQYYA-YNKNIYEYNILTIILGELFDELKTFL 187
TI A+ +SEK + KL KP AV+ +I+ A YN+ + NILT E+ +EL
Sbjct: 405 TIHAHESSEKQE-KLTIKPDVDAVKNAIIELVAKYNRVFAQINILTQNKPEIIEELTYLS 463
Query: 186 EEKAEDIQ 163
E + ED Q
Sbjct: 464 ESEVEDAQ 471
>UniRef50_A3DKN0 Cluster: SMC domain protein; n=1; Staphylothermus
marinus F1|Rep: SMC domain protein - Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1)
Length = 832
Score = 35.5 bits (78), Expect = 1.0
Identities = 30/150 (20%), Positives = 65/150 (43%)
Frame = -1
Query: 606 KVTEEGNKKVAVDGAKDAQQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVGLPENPAQVR 427
KV++ G + V + ++ + L + Y+ + K +V+ E G+ EI+ +
Sbjct: 105 KVSDPGGRLVVFEYVEENGEQKLKLIHDRYYSSEELKRRVLKELGIPEIISKQKPLIFTN 164
Query: 426 LIKPPFVIENGVVFIVDNDIYTIFANGTSEKTDFKLDAKPTASAVEATLIQYYAYNKNIY 247
I P N ++ + DN+ I + D + K S + + ++ N Y
Sbjct: 165 AIYVPQFSVNDIINLGDNE--RILLINKALNIDKYNNIKTNLSKLTSQILNSEIKNLRNY 222
Query: 246 EYNILTIILGELFDELKTFLEEKAEDIQSI 157
E + +I+ +EL+ ++E ++I +I
Sbjct: 223 EQRLESILGKNSIEELEKKIKEAEKEINNI 252
>UniRef50_A2FCP8 Cluster: Zinc finger, C2H2 type family protein;
n=1; Trichomonas vaginalis G3|Rep: Zinc finger, C2H2
type family protein - Trichomonas vaginalis G3
Length = 1139
Score = 35.1 bits (77), Expect = 1.3
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Frame = -1
Query: 507 PDKKPKVVTENGVQEIVGLPENPAQVRLIKPPFVIENGVV---FIVDNDIYT---IFANG 346
P+ KPKV TEN +++ P+ +++ IKP + V F + DI I N
Sbjct: 615 PEIKPKV-TENKPKQVESKPKLE-ELKQIKPKIEEKKSNVVTQFDIRPDIKQNEPIKQNV 672
Query: 345 TSEKTDFKLDAKPTASAVEATLI----QYYAYNKNIYEYNILTIILGELFDELKTFLEEK 178
E+T+ D P S +E I Q NKNI + N ++ + +EL + +
Sbjct: 673 VPEETNMTFDDAPHDSLLELEQIFKPKQSPEENKNIEDQNNSLLLQSNVLEELSSGSHSE 732
Query: 177 AEDIQSIA 154
EDI SI+
Sbjct: 733 NEDITSIS 740
>UniRef50_A6RNP2 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1468
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 285 TLIQYYAYNKNIYEYNILTIILGELFDELKTFLEEKAEDIQSIATRSRSGF 133
+L QYY++++ + I +L + L T+LE+ EDI + R+ + F
Sbjct: 358 SLYQYYSFDETFSSLQVYCAIAEQLANRLWTYLEDMPEDIHAFTQRTSTAF 408
>UniRef50_Q83AR5 Cluster: Primosomal protein N'; n=3; Coxiella
burnetii|Rep: Primosomal protein N' - Coxiella burnetii
Length = 662
Score = 33.9 bits (74), Expect = 3.1
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 294 VEATLIQYYAYNKNIYEYNILTIILG---ELFDELKTFLEEKAEDIQSIATRS 145
+ A+L++ Y + + Y Y I IILG LF + KT + EK E++ A S
Sbjct: 78 IPASLLKLYCWASDYYHYPIGEIILGSLPRLFRQGKTIISEKIEELNQAAPPS 130
>UniRef50_A6DDV9 Cluster: Putative uncharacterized protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative
uncharacterized protein - Caminibacter mediatlanticus
TB-2
Length = 401
Score = 33.9 bits (74), Expect = 3.1
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -1
Query: 294 VEATLIQYYAYNKNIYEYNILTIILGELFDELKTFLEEKAEDIQSI 157
+E ++ A K + NI +I +L DEL+ F EEK EDIQ I
Sbjct: 175 IEQKAVEEEAQTKEEVDENI--VITNDLVDELEEFKEEKNEDIQEI 218
>UniRef50_Q6K2S9 Cluster: Putative uncharacterized protein
OSJNBa0060K08.4; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0060K08.4 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 33.9 bits (74), Expect = 3.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 487 CDRKWGAGNRWPSRKPSSGEANQTTVCHRK 398
C R W + WP PSSGE VC R+
Sbjct: 92 CRRIWRLASYWPDPAPSSGEGGHLPVCQRE 121
>UniRef50_UPI0000D5659A Cluster: PREDICTED: similar to CG31716-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG31716-PA, isoform A - Tribolium castaneum
Length = 1097
Score = 33.5 bits (73), Expect = 4.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 279 IQYYAYNKNIYEYNILTIILGELFDELKTFLEEKAE 172
I YA+ +YN ++I+LG LFDELK FL +
Sbjct: 116 IAKYAFYAGFIDYNSISILLG-LFDELKLFLRSNGQ 150
>UniRef50_A0UYD4 Cluster: Methionine--tRNA ligase; n=4;
Clostridium|Rep: Methionine--tRNA ligase - Clostridium
cellulolyticum H10
Length = 678
Score = 33.5 bits (73), Expect = 4.0
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = -1
Query: 609 YKVTEEGNKKVAVDGAKD------AQQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVGLP 448
+ +T N+KVA D KD +Q DN+YFYGP + + G + P
Sbjct: 366 FTMTYLENQKVATDTWKDWWCSKESQVYQFIGEDNIYFYGPVEMAMFMGSQGKEVSANPP 425
Query: 447 ENPAQVRLIKPPFVIENGVVFI 382
E Q+ P + N V+F+
Sbjct: 426 EGDLQL----PKLICNNHVLFL 443
>UniRef50_A0LP34 Cluster: ErfK/YbiS/YcfS/YnhG family protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep:
ErfK/YbiS/YcfS/YnhG family protein - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 291
Score = 33.5 bits (73), Expect = 4.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 612 VYKVTEEGNKKVAVDGAKDAQQIMLDYSDNVYFYGPDKKPKVVTEN 475
VY+ ++G V VD D +++ Y + GP+KK K TE+
Sbjct: 246 VYEWADKGTMVVIVDSVDDTTRMLQSYFKQIKPVGPNKKKKTTTES 291
>UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmodium
(Vinckeia)|Rep: 1 beta dynein heavy chain - Plasmodium
yoelii yoelii
Length = 4507
Score = 33.5 bits (73), Expect = 4.0
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -1
Query: 372 DIYTIFANGTSEKTDFKLDA---KPTASAVEATLIQYYAYNKNIYEYNILTIILGELFD 205
DI + GT E DF +D P ++ ++ L YY K IYE IL++I+ LF+
Sbjct: 1018 DISNTYKKGT-ENNDFNIDVTVFNPMSTDIKK-LYGYYNNEKEIYEDGILSLIIKRLFE 1074
>UniRef50_A2DYD5 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 563
Score = 33.1 bits (72), Expect = 5.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 606 KVTEEGNKKVAVDGAKDAQQIMLDYSDNVYFYGPDKKPKVV 484
KV+++GN K+ V + + L + +V YGP+ KPK++
Sbjct: 280 KVSQKGNFKLRVVTRNERTESELVWEKSVLIYGPNDKPKII 320
>UniRef50_Q4HM05 Cluster: Periplasmic protein Cj0111; n=1;
Campylobacter lari RM2100|Rep: Periplasmic protein
Cj0111 - Campylobacter lari RM2100
Length = 259
Score = 32.7 bits (71), Expect = 7.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -1
Query: 324 KLDAKPTASAVEATLIQYYAYNKNIYEYNI--LTIILGELFDELKTFLEEKAEDIQS 160
+L + S E L+Q Y NK++ NI + ELF +++ + EEK +QS
Sbjct: 66 ELQKENLQSLFEENLLQKYTTNKSVNTQNIEQQASVFNELFGKIEDYQEEKTTKVQS 122
>UniRef50_Q21GW8 Cluster: Regulatory protein, LysR; n=8;
Proteobacteria|Rep: Regulatory protein, LysR -
Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM
17024)
Length = 313
Score = 32.7 bits (71), Expect = 7.1
Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Frame = -1
Query: 549 QIMLDYSDNVYFYGPDKKPKVVTENGVQEIV---GLPEN-PAQV--RLIKPPFVIENGVV 388
++ Y+D ++ G + + + +N ++E V G+ + P + +L+ P + G+
Sbjct: 63 KLAYSYADEIFQVGKELENAITKKNNIRERVFRVGISSSVPKSIAYKLLSPALEKDPGIH 122
Query: 387 FIV-DNDIYTIFANGTSEKTDFKLDAKPTASAV 292
+ DN++ +FA+ KTD + KP +S V
Sbjct: 123 LVCKDNNLEHLFADLALHKTDLVIADKPLSSDV 155
>UniRef50_Q0STB3 Cluster: Amino acid ABC transporter; n=3;
Clostridium perfringens|Rep: Amino acid ABC transporter
- Clostridium perfringens (strain SM101 / Type A)
Length = 262
Score = 32.7 bits (71), Expect = 7.1
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Frame = -1
Query: 609 YKVTEEGNKKVAVDGA--KDAQQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVGLPENPA 436
Y +T E KKVA + K+ Q I+ + N+ K V T++G + L ENP
Sbjct: 100 YTMTPEREKKVAFTNSYLKNRQVIVTLSNSNINTLKDLKGKTVTTQDGSSSLDTLFENPE 159
Query: 435 QVRLIKPPFVIENG--VVFIVDNDIYTIFANGTSEKTDFKLDAKPTASAVEATLIQYYAY 262
+ K NG V+F ND + G S+ A + L QYY +
Sbjct: 160 LTKSFK------NGEPVLFDSFNDCFMDLEAGRSD-----------AVVCDEILAQYYIF 202
Query: 261 NKNIYEYNILTIILGE 214
+ ++++LT LGE
Sbjct: 203 KNDPSKFHVLTEDLGE 218
>UniRef50_A6GQ32 Cluster: Probable methyltransferase; n=1;
Limnobacter sp. MED105|Rep: Probable methyltransferase -
Limnobacter sp. MED105
Length = 269
Score = 32.7 bits (71), Expect = 7.1
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -1
Query: 594 EGNKKVAVDGAKDAQQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVGLPENPAQVRLIKP 415
+G K V D Q L+ + V F PDK PK V + + + P +V +++
Sbjct: 188 QGGKLATVKAVADLQAHWLEAMEAVDFLNPDK-PKKVVQRLARMLAKTPLEQEEVDMLRG 246
Query: 414 PFVIENGVVFIVDNDIY 364
F + V+ +VDN +Y
Sbjct: 247 FF---SDVIRVVDNRLY 260
>UniRef50_O83842 Cluster: Flagellar hook-associated protein 2; n=1;
Treponema pallidum|Rep: Flagellar hook-associated
protein 2 - Treponema pallidum
Length = 722
Score = 32.7 bits (71), Expect = 7.1
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = -1
Query: 363 TIFANGTSEKTDFKLDAKPTASAVEATLIQYYA-YNKNIYEYNILTIILGELFDELKTFL 187
T+ + +EKT+ L P +A++ +I++ A YN+ + E NI+T + DEL
Sbjct: 476 TLSLHERTEKTE-TLSVTPDVNAMKNAIIEFVAKYNRLMAEINIVTSNKSAIIDELAYLT 534
Query: 186 -EEKAEDIQSIAT 151
EEK ++ + + +
Sbjct: 535 PEEKKKETEQLGS 547
>UniRef50_UPI00015B5D72 Cluster: PREDICTED: similar to viral A-type
inclusion protein, putative; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to viral A-type
inclusion protein, putative - Nasonia vitripennis
Length = 3263
Score = 32.3 bits (70), Expect = 9.3
Identities = 23/109 (21%), Positives = 53/109 (48%)
Frame = -1
Query: 480 ENGVQEIVGLPENPAQVRLIKPPFVIENGVVFIVDNDIYTIFANGTSEKTDFKLDAKPTA 301
E VQ+ E ++V+ ++ + + +DN+++ N + + +L P A
Sbjct: 1573 EAAVQQAQTCGECASKVQALEAKLQERDAEIENLDNELHNSIGNLVQMQENLRLSTIPAA 1632
Query: 300 SAVEATLIQYYAYNKNIYEYNILTIILGELFDELKTFLEEKAEDIQSIA 154
+A++ + +YN+ + +YN+LT E+ + + L E E ++ +A
Sbjct: 1633 P--DASMQE--SYNELMLQYNVLTATNEEMKAKYEATLHENEELLERVA 1677
>UniRef50_A7ADK3 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 571
Score = 32.3 bits (70), Expect = 9.3
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = -1
Query: 426 LIKPPFVIENGVVFIVDNDIYTIFANGTSEKTDFKLDAKPTASAVEATLIQYYAYNKNIY 247
L+KP E FI+ +D+ +G +K D + T +AV+A L + Y YNKN Y
Sbjct: 164 LMKPRSSAEETRAFII-SDLEKALNSGLPDKWDDANYGRVTLTAVQALLGKVYLYNKN-Y 221
Query: 246 E 244
E
Sbjct: 222 E 222
>UniRef50_A0KGT3 Cluster: Chemotaxis sensory transducer family
protein; n=2; Aeromonas|Rep: Chemotaxis sensory
transducer family protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 990
Score = 32.3 bits (70), Expect = 9.3
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 213 LFDELKTFLEEKAEDIQSIATRSRSGFRA*TPHGAIPQIEYKMCKLTILISNGIKLNIS 37
LFDE T L + S S+ A PH A+P ++ ++ L+S +LN++
Sbjct: 273 LFDEYATLLAADPRHLPSFEQLSQLPMLATLPHPALPDLQQRIISQPTLLSEPAELNLT 331
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,682,499
Number of Sequences: 1657284
Number of extensions: 11055263
Number of successful extensions: 31715
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 30714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31698
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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