Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31313
         (612 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0323 + 8947335-8947724                                           34   0.10 
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913...    29   3.8  
10_01_0325 - 3568783-3569040                                           28   6.7  
11_01_0791 + 6627961-6630702                                           27   8.9  

>02_02_0323 + 8947335-8947724
          Length = 129

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 487 CDRKWGAGNRWPSRKPSSGEANQTTVCHRK 398
           C R W   + WP   PSSGE     VC R+
Sbjct: 92  CRRIWRLASYWPDPAPSSGEGGHLPVCQRE 121


>10_08_0101 -
           14789994-14790205,14790290-14790957,14791232-14791345,
           14794826-14794932
          Length = 366

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 477 NGVQEIVGLPENPAQVRLIKPPFVIENG 394
           NG   +VGLPENP +V    PPF + +G
Sbjct: 274 NGKMILVGLPENPLEV----PPFSLVHG 297


>10_01_0325 - 3568783-3569040
          Length = 85

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 450 PENPAQVRLIKPPFVIENGVVFIVDNDIY 364
           PE+P    ++ P FV ++G + I+  DIY
Sbjct: 32  PEDPKNRIILHPAFVYDDGDLDIIQEDIY 60


>11_01_0791 + 6627961-6630702
          Length = 913

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
 Frame = -1

Query: 210 FDELKTFLEEKAEDIQ-----SIATRSRSGFRA*TPHGAIPQIEYKMCKLTILISNG 55
           +DEL   +  K  DI      SIA + R G+     +GA+ ++++++ +L++ ++NG
Sbjct: 488 YDELGKVISCKMHDIVRNLALSIAGQERFGYA--NDYGAVEKVDWEVRRLSLFLNNG 542


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,547,419
Number of Sequences: 37544
Number of extensions: 287496
Number of successful extensions: 685
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)