Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31313
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank...    29   4.9  
AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P...    29   4.9  
AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P...    29   4.9  

>AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple
           ankyrin repeat singleKH domain protein protein.
          Length = 4001

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 24/69 (34%), Positives = 32/69 (46%)
 Frame = +2

Query: 290 STAEAVGFASSLKSVFSLVPFANIV*MSLSTIKTTPFSMTNGGLISLT*AGFSGRPTISC 469
           +TA+  G +SS  S     P A     S ST  TT  +++ GG  S +  G  G  T+  
Sbjct: 125 NTAKMSGTSSSQSSATPTPPTA-----SSSTTTTTTTNISTGGGGSGSSGGGGGSTTVIA 179

Query: 470 TPFSVTTFG 496
            P SVT  G
Sbjct: 180 NPASVTNTG 188


>AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB,
           isoform B protein.
          Length = 4001

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 24/69 (34%), Positives = 32/69 (46%)
 Frame = +2

Query: 290 STAEAVGFASSLKSVFSLVPFANIV*MSLSTIKTTPFSMTNGGLISLT*AGFSGRPTISC 469
           +TA+  G +SS  S     P A     S ST  TT  +++ GG  S +  G  G  T+  
Sbjct: 125 NTAKMSGTSSSQSSATPTPPTA-----SSSTTTTTTTNISTGGGGSGSSGGGGGSTTVIA 179

Query: 470 TPFSVTTFG 496
            P SVT  G
Sbjct: 180 NPASVTNTG 188


>AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA,
           isoform A protein.
          Length = 4001

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 24/69 (34%), Positives = 32/69 (46%)
 Frame = +2

Query: 290 STAEAVGFASSLKSVFSLVPFANIV*MSLSTIKTTPFSMTNGGLISLT*AGFSGRPTISC 469
           +TA+  G +SS  S     P A     S ST  TT  +++ GG  S +  G  G  T+  
Sbjct: 125 NTAKMSGTSSSQSSATPTPPTA-----SSSTTTTTTTNISTGGGGSGSSGGGGGSTTVIA 179

Query: 470 TPFSVTTFG 496
            P SVT  G
Sbjct: 180 NPASVTNTG 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,778,051
Number of Sequences: 53049
Number of extensions: 500169
Number of successful extensions: 1316
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)