Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31313
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z81050-10|CAB02860.1|  329|Caenorhabditis elegans Hypothetical p...    29   3.5  
AC084158-7|AAK68560.1|  929|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical
           protein R10D12.2 protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
 Frame = -1

Query: 324 KLDAKPTASAVEATLIQYYAYNKNIYEYNI------LTIILGELFDELKTF 190
           K+ A+     V A LI+YY   KN+ E  I      LT++LG +F   K +
Sbjct: 332 KIVAQEHYLGVSAALIEYYKTEKNMEEMEIAVRFADLTLLLGPIFVSFKAY 382


>Z81050-10|CAB02860.1|  329|Caenorhabditis elegans Hypothetical
           protein C50B6.12 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/85 (21%), Positives = 37/85 (43%)
 Frame = +1

Query: 310 FCVQFEISFLTCTVRKYSINVVIYNKNNTVFYDKRWFD*PHLSWVFGKANDFLHPIFGHN 489
           F +   + ++TC    Y   +V +     +F    +   PH+    G    F H I   +
Sbjct: 22  FLIYLTLFYITCIRGIYKYMIVWFAFGCIIFDLTEFISRPHIHNFNGSLTYFSHTILSED 81

Query: 490 FRLFVGTVKVNVIGVIKHNLLGIFS 564
           F L+  T+ +++ G +  +L+ I +
Sbjct: 82  F-LYFWTIFIDIYGGMYCSLITIIA 105


>AC084158-7|AAK68560.1|  929|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.16 protein.
          Length = 929

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 573 VDGAKDAQQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVGLP-ENPAQVRLIKPPFVIEN 397
           +DGA      + DY+  ++  G  K  +      +Q  +  P ++ AQ  L   PF+I  
Sbjct: 349 IDGACHVSGDVFDYTQKLFHTGR-KFDETKKAQYLQMCIEQPTQDRAQYALEVDPFIIVM 407

Query: 396 GVVFIVDNDIYTIFANGTSE 337
           G +F   +  + +FAN + E
Sbjct: 408 GELFAWASIEHDVFANASRE 427


>Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical
           protein C54G4.2 protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
 Frame = -1

Query: 507 PDKKPKVVTENGVQEIVGLPENPAQVRLIKPPFVIENGVVFIVDNDIYTI--FANGTSEK 334
           PD+K  V+TE+GV  +   PE  A V   +    IE+G  +I   + YT     +G  E+
Sbjct: 216 PDRKEPVMTEDGV--MTRYPELLAAV--AEDGLKIEDGKQWIGLVEDYTTGKMDDGIIEE 271

Query: 333 TDFKLDAKPTASAVEATLIQYYAYNK-NIYEYNILTIILGELFDEL----KTFLEEKAED 169
           +  +L+   T +A++    +++  N  N Y  + L  +  E  D      +T   E+   
Sbjct: 272 SRDQLNPYDTMAALQDRSEKFFRMNSVNYYTMSNLLTLSKEAIDRFAAQEQTTAAERRRK 331

Query: 168 IQSIATRSRSG 136
            +++ T   +G
Sbjct: 332 EEALKTSKENG 342


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,997,931
Number of Sequences: 27780
Number of extensions: 272379
Number of successful extensions: 760
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)