Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31311
(616 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56| Best HMM Match : Actin (HMM E-Value=0) 427 e-120
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 427 e-120
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 426 e-120
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 423 e-119
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 323 6e-89
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 231 3e-61
SB_54| Best HMM Match : Actin (HMM E-Value=0) 212 2e-55
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 206 1e-53
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 196 1e-50
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 3e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 2e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 79 4e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 69 3e-12
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 50 1e-06
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 47 1e-05
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.32
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.98
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.7
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 29 3.0
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 3.0
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 4.0
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 6.9
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 27 9.1
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 427 bits (1051), Expect = e-120
Identities = 199/202 (98%), Positives = 202/202 (100%)
Frame = +1
Query: 1 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITN 180
AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TN
Sbjct: 19 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTN 78
Query: 181 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 360
WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA
Sbjct: 79 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 138
Query: 361 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 540
VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY
Sbjct: 139 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 198
Query: 541 SFTTTAEREIVRDIKEKLCYVA 606
SFTTTAEREIVRDIKEKLCYVA
Sbjct: 199 SFTTTAEREIVRDIKEKLCYVA 220
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 427 bits (1051), Expect = e-120
Identities = 199/202 (98%), Positives = 202/202 (100%)
Frame = +1
Query: 1 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITN 180
AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TN
Sbjct: 20 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTN 79
Query: 181 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 360
WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA
Sbjct: 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Query: 361 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 540
VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY
Sbjct: 140 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199
Query: 541 SFTTTAEREIVRDIKEKLCYVA 606
SFTTTAEREIVRDIKEKLCYVA
Sbjct: 200 SFTTTAEREIVRDIKEKLCYVA 221
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 426 bits (1049), Expect = e-120
Identities = 198/202 (98%), Positives = 202/202 (100%)
Frame = +1
Query: 1 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITN 180
AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TN
Sbjct: 20 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTN 79
Query: 181 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 360
WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA
Sbjct: 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Query: 361 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 540
VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGY
Sbjct: 140 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGY 199
Query: 541 SFTTTAEREIVRDIKEKLCYVA 606
SFTTTAEREIVRDIKEKLCYVA
Sbjct: 200 SFTTTAEREIVRDIKEKLCYVA 221
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 423 bits (1042), Expect = e-119
Identities = 198/202 (98%), Positives = 201/202 (99%)
Frame = +1
Query: 1 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITN 180
AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TN
Sbjct: 19 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTN 78
Query: 181 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 360
WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA
Sbjct: 79 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 138
Query: 361 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 540
VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY
Sbjct: 139 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 198
Query: 541 SFTTTAEREIVRDIKEKLCYVA 606
SFTTTAEREIVRDIKEKL YVA
Sbjct: 199 SFTTTAEREIVRDIKEKLAYVA 220
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 323 bits (794), Expect = 6e-89
Identities = 164/202 (81%), Positives = 168/202 (83%)
Frame = +1
Query: 1 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITN 180
AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TN
Sbjct: 20 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTN 79
Query: 181 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 360
WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA
Sbjct: 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Query: 361 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 540
VLSLYASGRTTGIV+DS G + H + I ERGY
Sbjct: 140 VLSLYASGRTTGIVMDS------------GDGVSHTV---------------PIYEERGY 172
Query: 541 SFTTTAEREIVRDIKEKLCYVA 606
SFTTTAEREIVRDIKEKLCYVA
Sbjct: 173 SFTTTAEREIVRDIKEKLCYVA 194
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 231 bits (565), Expect = 3e-61
Identities = 107/203 (52%), Positives = 145/203 (71%), Gaps = 3/203 (1%)
Frame = +1
Query: 4 GFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 177
G+AG + P +FPS+VGRP R + + KD VGDEA R +L + YP+++GI+
Sbjct: 21 GYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVR 80
Query: 178 NWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 354
NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE + +Y+AI
Sbjct: 81 NWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAI 140
Query: 355 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 534
QAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ R
Sbjct: 141 QAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLR 200
Query: 535 GYSFTTTAEREIVRDIKEKLCYV 603
GY+F TA+ E VR +KEKLCYV
Sbjct: 201 GYAFNHTADFETVRMMKEKLCYV 223
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 212 bits (518), Expect = 2e-55
Identities = 95/137 (69%), Positives = 116/137 (84%)
Frame = +1
Query: 196 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 375
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 376 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 555
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 556 AEREIVRDIKEKLCYVA 606
AE++I+RD+KE LCY A
Sbjct: 2249 AEQQIIRDLKETLCYCA 2265
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +1
Query: 1 AGFAGDDAPRAVFPSIVGRPRHQ 69
AG + D++PR VFP+IVGRPRH+
Sbjct: 2108 AGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 206 bits (503), Expect = 1e-53
Identities = 98/106 (92%), Positives = 103/106 (97%)
Frame = +1
Query: 289 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 468
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 469 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 606
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 183
Score = 150 bits (364), Expect = 8e-37
Identities = 68/72 (94%), Positives = 69/72 (95%)
Frame = +1
Query: 1 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITN 180
AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TN
Sbjct: 19 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTN 78
Query: 181 WDDMEKIWHHTF 216
WDDMEKI TF
Sbjct: 79 WDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 196 bits (478), Expect = 1e-50
Identities = 92/99 (92%), Positives = 96/99 (96%)
Frame = +1
Query: 310 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 489
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 490 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 606
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVA 99
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (417), Expect = 3e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +1
Query: 244 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 423
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 424 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 591
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 2e-23
Identities = 48/126 (38%), Positives = 80/126 (63%)
Frame = +1
Query: 154 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 333
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 334 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 513
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 514 MKILTE 531
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +1
Query: 355 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 531
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 532 RGYSFTTTAEREIVRDIKEKLCYVA 606
RG++FT+++ +IV DIKEK+CY++
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLS 851
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +1
Query: 4 GFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRGILTL 147
GFAGD PR + P++VG P+ +++G + KD GD A +K G++ L
Sbjct: 715 GFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Frame = +1
Query: 349 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 504
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 505 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAP 609
++ ++L ER E + IKE+ Y+ P
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICP 134
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 82 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 261
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 391 TGIVLDSGDGVSHTVPI 441
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 50.0 bits (114), Expect = 1e-06
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = +1
Query: 4 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--PIEHGIIT 177
GFA + APR++ P+ + + + + ++ ++GD+ + + L Y P + G +
Sbjct: 248 GFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDYSALFYVLPFQKGFLV 299
Query: 178 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 357
NWD ++IW +TF E + M +I+FE +N A+
Sbjct: 300 NWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNFKALSRTTA 339
Query: 358 AVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 477
A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 340 AQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR 385
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 4 GFAGDDAPRAVFPSIVGRPRHQ 69
GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1371 GFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 199 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 378
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 379 SGRTTGIV 402
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -2
Query: 567 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 400
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 399 DTGGTTGGVQ 370
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -2
Query: 66 VARATHDGREDGAGRVVAGETG 1
+AR+ DG E+G+G +V+GETG
Sbjct: 1 MARSADDGGENGSGSIVSGETG 22
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 145 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 297
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 286 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 402
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 531 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 388
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -2
Query: 306 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 127
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 126 AL 121
++
Sbjct: 214 SV 215
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 17 TTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 121
TT+P P +PSWV + + W TW RP
Sbjct: 50 TTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 491 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 312
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 311 IWVIFSLLALGLR 273
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 48 RGSPSPPGRDGRYGPERLLRG*RGPEQERYPHSEVPH 158
RG P PGRDG G + G RGP E+ E H
Sbjct: 420 RGEPGAPGRDGAPGAQ----GERGPRGEQGKQGEKGH 452
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 3.0
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 431 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 279
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 278 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 114
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 474 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 376
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 289 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 438
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 274 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 402
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 440 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 264
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 263 VSSTGCSSGATRSSL*KVW 207
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -3
Query: 365 STAWMATYMAGELKVSNMIWV---IFSLLALGL 276
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +3
Query: 417 WCLPHRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS 575
WC H+ R PR P G WS PH++ + L H H G S
Sbjct: 352 WCAKHQ---ERSHQQPRQPDQGQSWS-----PHKE-YNVTFLHHRHHPTGQSS 395
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,744,360
Number of Sequences: 59808
Number of extensions: 407209
Number of successful extensions: 1566
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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