Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31310
         (488 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical pr...    28   3.2  
AF022974-8|AAX22288.1|  289|Caenorhabditis elegans Serpentine re...    28   3.2  

>Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical
           protein B0001.7 protein.
          Length = 731

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 15/26 (57%), Positives = 15/26 (57%)
 Frame = +1

Query: 253 KHRAVSERRLKSLVGQWCQ*RFDVLS 330
           KHR V    L  LVGQW Q  FDV S
Sbjct: 290 KHREVDSPMLSPLVGQWIQ--FDVQS 313


>AF022974-8|AAX22288.1|  289|Caenorhabditis elegans Serpentine
           receptor, class sx protein10 protein.
          Length = 289

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 139 PTNSKFCIFFIGYFLLAQ*VSDVLALV 219
           P N   C +FI YF+ +Q   D++ L+
Sbjct: 72  PMNRYKCFWFISYFIFSQTAQDIIMLI 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,535,751
Number of Sequences: 27780
Number of extensions: 204295
Number of successful extensions: 400
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)