Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31306
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.57 
AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding pr...    25   3.0  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 164  VVELRRGQSRLAAQLVQAHESVVRPRYRLAVVASKRRRLVVQS 36
            + + RR    LA +L   H+S+     R+  + SKR+ +++Q+
Sbjct: 901  MAKARREVQALAKELAAIHQSIANIESRIESMKSKRQTILMQA 943


>AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP8 protein.
          Length = 176

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = +3

Query: 27  YPITLNDETASLRSDHSQSVARTYNGLVCLDELCCQ--AGLSASQLD 161
           YP+  N    S+   H   V RT+       + C Q  AG  +S +D
Sbjct: 35  YPVLRNSTPFSIFQTHGAYVVRTFADATAYRDECVQQYAGRGSSLID 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,981
Number of Sequences: 2352
Number of extensions: 12038
Number of successful extensions: 95
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)