Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31306
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34533-6|CAA84300.2|  371|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AY158690-1|AAN41642.1|  371|Caenorhabditis elegans choline kinas...    28   5.6  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    28   7.4  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    28   7.4  
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    27   9.8  
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    27   9.8  
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr...    27   9.8  
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z34533-6|CAA84300.2|  371|Caenorhabditis elegans Hypothetical
           protein B0285.8 protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 357 WSCFIIKL*LSNYNC 313
           W+CF++KL L  YNC
Sbjct: 323 WACFVMKLALLKYNC 337


>AY158690-1|AAN41642.1|  371|Caenorhabditis elegans choline kinase
           CKB-1 protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 357 WSCFIIKL*LSNYNC 313
           W+CF++KL L  YNC
Sbjct: 323 WACFVMKLALLKYNC 337


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
           protein 1 protein.
          Length = 4568

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 151 DADSPAWQHSSSRHTSPLYVLATDWLWSLRSDAVSS 44
           D DSPAW+++  R+   + V+ T     L+S   SS
Sbjct: 522 DVDSPAWENAFKRYEDQIGVVETAITTRLKSQLESS 557


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
           protein.
          Length = 4568

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 151 DADSPAWQHSSSRHTSPLYVLATDWLWSLRSDAVSS 44
           D DSPAW+++  R+   + V+ T     L+S   SS
Sbjct: 522 DVDSPAWENAFKRYEDQIGVVETAITTRLKSQLESS 557


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 36   TLNDETA--SLRSDHSQSVARTYNGLVCLDELCCQAGLSASQLDDQLE 173
            +LN ETA  SLR  H  SVA     L  L +L  ++    S+L   LE
Sbjct: 1195 SLNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLE 1242


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 36   TLNDETA--SLRSDHSQSVARTYNGLVCLDELCCQAGLSASQLDDQLE 173
            +LN ETA  SLR  H  SVA     L  L +L  ++    S+L   LE
Sbjct: 1195 SLNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLE 1242


>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
           protein ZK688.5b protein.
          Length = 1595

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -2

Query: 138 PPGSTARPGTRVRCTSSLPTGCGRFEATPSRRSKLLDTYKPF 13
           PPGS  +PGT  R T+       RF   P  R    +T  PF
Sbjct: 637 PPGSDQQPGTSRRFTTH------RFNVQPDARGAETETLAPF 672


>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
           protein ZK688.5a protein.
          Length = 1620

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -2

Query: 138 PPGSTARPGTRVRCTSSLPTGCGRFEATPSRRSKLLDTYKPF 13
           PPGS  +PGT  R T+       RF   P  R    +T  PF
Sbjct: 637 PPGSDQQPGTSRRFTTH------RFNVQPDARGAETETLAPF 672


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,384,226
Number of Sequences: 27780
Number of extensions: 284094
Number of successful extensions: 758
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)