Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31306
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52110.1 68418.m06468 expressed protein similar to unknown pr... 29 2.2
At5g36860.1 68418.m04416 Ulp1 protease family protein contains P... 28 6.8
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 28 6.8
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 28 6.8
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 27 9.0
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 27 9.0
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 27 9.0
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 27 9.0
>At5g52110.1 68418.m06468 expressed protein similar to unknown
protein (pir||S76150)
Length = 275
Score = 29.5 bits (63), Expect = 2.2
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = -3
Query: 356 GLVLLLN-YDCQIIIA*VDKKCYAIALPRQFPSATHLFFYFFILGSIFELPSLDDEGDVR 180
G +LLLN + I+ + A+ L S + F+ GS+ E SL +EG+
Sbjct: 72 GSLLLLNHFSASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVEQRSLPEEGE-- 129
Query: 179 VPLQLVVELRRGQSRLAAQLVQAHESVVRPRYRLAVVASKRRRLVVQSYW 30
V+ G S L L A ++R +AV+ S + L V+ YW
Sbjct: 130 --QVFVISSNIGDS-LKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYW 176
>At5g36860.1 68418.m04416 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1204
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 179 VPLQLVVELRRGQSRLAAQLVQAHESV---VRPRYRLAVVASKRR 54
VP + +VE+RR L Q+ Q HE + VR + R A+ +R
Sbjct: 458 VPERFIVEMRRSLKELEDQMYQMHEDMKDFVRDQIRAALDPKGKR 502
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 179 VPLQLVVELRRGQSRLAAQLVQAHESV---VRPRYRLAVVASKRR 54
VP + +VE+RR L Q+ Q HE + VR + R A+ +R
Sbjct: 438 VPERFIVEMRRSLKELEDQMYQMHEDMKDFVRDQIRAALDPKGKR 482
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 179 VPLQLVVELRRGQSRLAAQLVQAHESV---VRPRYRLAVVASKRR 54
VP + +VE+RR L Q+ Q HE + VR + R A+ +R
Sbjct: 425 VPERFIVEMRRSLKELEDQMYQMHEDMKDFVRDQIRAALDPKGKR 469
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -3
Query: 179 VPLQLVVELRRGQSRLAAQLVQAHESV---VRPRYRLAVVASKRRR 51
VP + +VE+RR L Q+ Q HE + VR + R AV+ K +R
Sbjct: 404 VPERFIVEMRRSFKELEDQMYQMHEDMKDFVRDQIR-AVLDPKGKR 448
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 179 VPLQLVVELRRGQSRLAAQLVQAHESV---VRPRYRLAVVASKRR 54
VP + +VE+RR L Q+ Q HE + VR + R A+ +R
Sbjct: 458 VPERFIVEMRRSFKELEDQMYQMHEDMKDFVRDQIRAALDPKGKR 502
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 179 VPLQLVVELRRGQSRLAAQLVQAHESV---VRPRYRLAVVASKRR 54
VP + +VE+RR L Q+ Q HE + VR + R A+ +R
Sbjct: 458 VPERFIVEMRRSFKELEDQMYQMHEDMKDFVRDQIRAALDPKGKR 502
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 179 VPLQLVVELRRGQSRLAAQLVQAHESV---VRPRYRLAVVASKRR 54
VP + +VE+RR L Q+ Q HE + VR + R A+ +R
Sbjct: 458 VPERFIVEMRRSFKELEDQMYQMHEDMKDFVRDQIRAALDPKGKR 502
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,340,337
Number of Sequences: 28952
Number of extensions: 249132
Number of successful extensions: 588
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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