Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31299
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    32   0.46 
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    32   0.46 
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AC024790-15|AAK84608.3|  191|Caenorhabditis elegans Hypothetical...    28   5.7  
Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U42846-1|AAA83600.2|  872|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = +2

Query: 194  DASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRT 373
            D   A + +S +  P+  P+ + +      Y    +++P    PLP P ++A  +++   
Sbjct: 946  DEQPASESTSAFDIPEHPPVIVPFRNAPIVYSSQTSNIPQIHPPLPPPRFLAMPMQF-SG 1004

Query: 374  HPPKPEVGQRI 406
            HPP   +G  I
Sbjct: 1005 HPPPVIMGPPI 1015


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = +2

Query: 194  DASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRT 373
            D   A + +S +  P+  P+ + +      Y    +++P    PLP P ++A  +++   
Sbjct: 946  DEQPASESTSAFDIPEHPPVIVPFRNAPIVYSSQTSNIPQIHPPLPPPRFLAMPMQF-SG 1004

Query: 374  HPPKPEVGQRI 406
            HPP   +G  I
Sbjct: 1005 HPPPVIMGPPI 1015


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 287 QPSGAHLPTTPAPLPIPDYIARAIE-YIRTHPPKPEVGQR 403
           +PS    P+ P P P+P+ I   ++  +   P KP V +R
Sbjct: 47  EPSSPTRPSEPIPPPLPEPIPELVQILLAAEPNKPSVPKR 86


>AC024790-15|AAK84608.3|  191|Caenorhabditis elegans Hypothetical
           protein Y47D7A.14 protein.
          Length = 191

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 560 YPIRPYSESYYNSLAVVYNVVTGKTLALPNLIALQHIPL 676
           Y   PYS++ Y+    + NVV+  +  LP  I+++ IP+
Sbjct: 46  YAALPYSQATYHFAVTLSNVVSPLSSFLPFFISVRSIPV 84


>Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical
           protein W04D2.4 protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 89  SQDADVFPDKYQYQYQTSNGISGQEQGALVNEGREDASI 205
           S  + VFP + +YQY+   G+   EQ  L + G  D ++
Sbjct: 558 SSSSTVFPTRSKYQYRPGKGLERAEQDYL-SRGNGDITL 595


>U42846-1|AAA83600.2|  872|Caenorhabditis elegans Hypothetical
           protein T19D2.1 protein.
          Length = 872

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -2

Query: 505 YFTYCETRHINDRQCYGLRCFNNSRPYQLSYNLNTLADLWLGWMS 371
           +  +C  +  + R CYG RC   +    L   +N  + LW GW S
Sbjct: 793 FAAFCRGKDSDVRNCYGQRCSETTTRRPL---VNR-SGLWTGWSS 833


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,810,941
Number of Sequences: 27780
Number of extensions: 337459
Number of successful extensions: 898
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)