Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31298
         (312 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.035
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.035
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.035
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.035
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.11 
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    24   0.43 
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   0.43 
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   0.43 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   1.7  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    22   1.7  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   3.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   4.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   4.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   6.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   6.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   9.2  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    19   9.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    19   9.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    19   9.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.035
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 312 PDLLHVIPVGDDTVLD 265
           PD+  +IP GDDT +D
Sbjct: 356 PDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.035
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 312 PDLLHVIPVGDDTVLD 265
           PD+  +IP GDDT +D
Sbjct: 356 PDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.035
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 312 PDLLHVIPVGDDTVLD 265
           PD+  +IP GDDT +D
Sbjct: 356 PDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.035
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 312 PDLLHVIPVGDDTVLD 265
           PD+  +IP GDDT +D
Sbjct: 356 PDISEIIPTGDDTTMD 371


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.11
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 230  WASSPT*ESFWPIPTITPWWRGRPTMDGKTAR 135
            W + P+  ++W   T +PWW    T    T R
Sbjct: 1035 WTTKPS--TWWSSTTTSPWWTTTTTRRTTTTR 1064



 Score = 21.0 bits (42), Expect = 3.0
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = -2

Query: 230  WASSPT*ESFWPIPTITPWWRGRPTMDGKTAR 135
            W SS T   +W   T       RPT    T R
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTR 1073



 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 125  TTRPAPSSRPSWVALATRA*WSVWARKTPT 214
            TTR   ++RP+  +  TR   + W  +  T
Sbjct: 1056 TTRRTTTTRPTTTSTTTRPTTTNWPTQGTT 1085


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.8 bits (49), Expect = 0.43
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 1   AVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGF 117
           A+ S+   P    +KF +  D   A+V   G GM  AGF
Sbjct: 50  ALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGM-NAGF 87


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.8 bits (49), Expect = 0.43
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 1   AVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGF 117
           A+ S+   P    +KF +  D   A+V   G GM  AGF
Sbjct: 283 ALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGM-NAGF 320


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.8 bits (49), Expect = 0.43
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 1   AVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGF 117
           A+ S+   P    +KF +  D   A+V   G GM  AGF
Sbjct: 283 ALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGM-NAGF 320


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 20/95 (21%), Positives = 37/95 (38%)
 Frame = +1

Query: 28  TQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 207
           T  +  F   +DD + L++DN + +   G     A +   P++       G   G     
Sbjct: 51  THVNYAFLGLNDDGSLLILDNATDITNGGLQKVAALKKTNPALKALFSLGGYAAGTATFT 110

Query: 208 SYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIW 312
           +   D   +KR  +  K  +E     N+D ++  W
Sbjct: 111 AVAAD--ATKRATMA-KSALEFFETYNFDGLDVDW 142


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 1   AVESIPASPTQTHTKFKMCDDDVAALVVDNGSGM 102
           A+ S+   P    +KF +  D   A+V   G GM
Sbjct: 65  ALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGM 98


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 246 PHSEVPHRARYHHQ 287
           PH EVP    Y+H+
Sbjct: 16  PHQEVPPPFGYYHE 29


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 74  RL*STMAPACARPVSPATTRPAPSSRPSW 160
           R+  T+ P   RP+ PAT   AP     W
Sbjct: 28  RVLPTVEPGYLRPLIPAT---APQKPDKW 53


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 65  MLLRL*STMAPACARPVSPATTRPAPSSR 151
           +L  L S+ +    +P + +  RPAP+SR
Sbjct: 237 LLAGLQSSGSSRSHQPATKSKPRPAPASR 265


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -2

Query: 197 PIPTITPWWRGRPTM 153
           P P    WW G  +M
Sbjct: 262 PYPVYNQWWSGPLSM 276


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 118 AGDDAPRAVFPSIVGRPRHQGVMVG 192
           AG  +PR    +   RP HQ    G
Sbjct: 62  AGFPSPRGALGAYPFRPMHQNSYTG 86


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 199 GPYRPSRPGGEGD 161
           GP++PS  GG  D
Sbjct: 470 GPWKPSMHGGVCD 482


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 177 GRDGRYGPERLL 212
           G D  YGPE LL
Sbjct: 89  GNDDIYGPEFLL 100


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 83  STMAPACARPVSPATTRPAPSSRPSWVALATR 178
           +T APA     SP+ + P  SS  +  + A R
Sbjct: 28  TTEAPAAYSSSSPSGSSPQHSSSSASTSPAAR 59


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 83  STMAPACARPVSPATTRPAPSSRPSWVALATR 178
           +T APA     SP+ + P  SS  +  + A R
Sbjct: 28  TTEAPAAYSSSSPSGSSPQHSSSSASTSPAAR 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,122
Number of Sequences: 336
Number of extensions: 1623
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)