Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31298
(312 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 192 4e-50
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 8e-49
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 6e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 6e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 2e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 5e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 3e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 3e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 6e-10
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 4e-09
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 43 4e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 42 8e-05
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.062
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.11
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 0.33
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 0.58
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 1.3
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 1.8
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 1.8
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 1.8
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 27 2.3
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 2.3
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 3.1
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 3.1
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_54780| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011) 27 4.1
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 27 4.1
SB_23441| Best HMM Match : IncA (HMM E-Value=2.5) 27 4.1
SB_44729| Best HMM Match : SET (HMM E-Value=0) 26 5.4
SB_42387| Best HMM Match : CH (HMM E-Value=2.7) 26 5.4
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 26 5.4
SB_13742| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_10531| Best HMM Match : SET (HMM E-Value=0) 26 5.4
SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 23 9.4
SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_29236| Best HMM Match : TMS_TDE (HMM E-Value=0) 25 9.5
SB_3357| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_52201| Best HMM Match : DUF1557 (HMM E-Value=7.1) 25 9.5
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 192 bits (469), Expect = 4e-50
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = +1
Query: 52 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 231
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 232 SKRGILTLKYPIEHGIITNWDDMEKIW 312
SKRGILTLKYPIEHGI+TNWDDMEKIW
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIW 87
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 188 bits (458), Expect = 8e-49
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +1
Query: 52 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 231
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 232 SKRGILTLKYPIEHGIITNWDDMEKIW 312
SKRGILTLKYPIEHGI+TNWDDMEKIW
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIW 87
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 185 bits (451), Expect = 6e-48
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +1
Query: 52 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 231
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 232 SKRGILTLKYPIEHGIITNWDDMEKIW 312
SKRGILTLKYPIEHGI+TNWDDMEKIW
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIW 87
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 185 bits (451), Expect = 6e-48
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +1
Query: 58 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 237
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 238 RGILTLKYPIEHGIITNWDDMEKIW 312
RGILTLKYPIEHGI+TNWDDMEKIW
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIW 86
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (447), Expect = 2e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 58 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 237
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 238 RGILTLKYPIEHGIITNWDDMEKIW 312
RGILTLKYPIEHGI+TNWDDMEKIW
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIW 86
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 182 bits (443), Expect = 5e-47
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 58 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 237
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 238 RGILTLKYPIEHGIITNWDDMEKI 309
RGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKI 85
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 83.4 bits (197), Expect = 3e-17
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +1
Query: 70 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 243
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 244 ILTLKYPIEHGIITNWDDMEKIW 312
+L + YP+++GI+ NWDDM+ +W
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVW 89
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 60.5 bits (140), Expect = 3e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 19 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 177
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 6e-10
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 76 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 177
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 4e-09
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +1
Query: 13 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 192
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 193 --MGQKD-SYVGDEAQSKRGILTL 255
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 2e-07
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -1
Query: 174 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 58
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 43.2 bits (97), Expect = 4e-05
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 67 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 246
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 247 LTLKY--PIEHGIITNWDDMEKIW 312
L Y P + G + NWD ++IW
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIW 308
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 42.3 bits (95), Expect = 8e-05
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 190 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIW 312
G+ D ++GDEA K T K+PI H I+ +WD ME+ W
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFW 317
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.062
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 83 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 229
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 47 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 151
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 0.33
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 47 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 151
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 0.58
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 38 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 151
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 32 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 157
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 32 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 157
K T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 38 TQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 157
T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 51 TTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPT 90
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 32 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 157
K T ++ ATT +T PA P P TT P ++ P+
Sbjct: 77 KPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 38 TQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 157
T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 93 TTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPT 132
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 32 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 157
K T ++ ATT + +T P P P TT P ++ P+
Sbjct: 105 KPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPT 146
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 47 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 151
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 179 PWWRGRPTMDGKTARGASSPAKPALHMPEP 90
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 SRCATTMLLR-L*STMAPACARPVSPAT 127
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 SRCATTMLLR-L*STMAPACARPVSPAT 127
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 SRCATTMLLR-L*STMAPACARPVSPAT 127
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 49 KMCDDDVAALVVDNG-SGMCKAGFAGD 126
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 2 P*SQYQRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 151
P + P T S C +L+R T+ APA P SPAT P R
Sbjct: 398 PADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 173 WRGRPTMDGKTARGASSPAKPALHMPEP 90
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 149 GKTARGASSPAKPALHMPEP 90
G T R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 70 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 174
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 47 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 151
S C T+++R T+ APA P SPAT P R
Sbjct: 51 SSCLATLVVRPLETIPAPAPTTPTSPATPASGPPIR 86
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 47 SRCATTMLLR-L*STMAPACARPVSPAT 127
S C T L+R L +T APA P SPAT
Sbjct: 523 SSCLATFLVRTLETTPAPAPTTPTSPAT 550
>SB_54780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 45 VQDVRRRCCCACSRQW 92
V+D+ CCAC R+W
Sbjct: 108 VKDILSSVCCACPRRW 123
>SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2032
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 252 SEDTSLALGLVTHVGVFLAHTDHHALVARATHD 154
S DT+ L LV+HVG + A D L HD
Sbjct: 1835 SRDTTCRLWLVSHVGGWAADVDKSPLQTLYGHD 1867
>SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011)
Length = 211
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 47 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 151
S C T+L+R L + APA P SPAT A R
Sbjct: 148 SSCLATLLVRPLETAPAPAPTTPTSPATPASAAPIR 183
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 71 LRL*STMAPACARPVSPATTRPAP 142
L+L ST+ P+ P++PA P P
Sbjct: 185 LQLLSTLIPSTTAPINPAAINPTP 208
>SB_23441| Best HMM Match : IncA (HMM E-Value=2.5)
Length = 927
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 266 MGYFRVRIPLLLWASSPT*ESFWPIPTITP 177
MGY ++ P +W + + P PT+TP
Sbjct: 363 MGYVVIKAPYPVWTLLSSTPTITPTPTVTP 392
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 23 PQHKHTQSSRCATTMLLRL*STMAPAC 103
PQ+KH ++++C T + L + P C
Sbjct: 729 PQYKHIKTNKCTTAQRIILDPSEMPVC 755
>SB_42387| Best HMM Match : CH (HMM E-Value=2.7)
Length = 703
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 59 TTMLLR-L*STMAPACARPVSPATTRPAPSSR 151
TT+L+R L +T APA P SP T P R
Sbjct: 185 TTLLVRPLETTPAPAPTTPTSPVTPASGPPIR 216
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 26.2 bits (55), Expect = 5.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 39 HKVQDVRRRCCCACSR 86
H+ D R CCC C R
Sbjct: 1438 HQFDDAIRECCCLCCR 1453
>SB_13742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = -1
Query: 246 DTSLALGLVTHVGVFLAHTDHHALVARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSN 67
DT + VTHV AH D H TH R A R G H I +++
Sbjct: 46 DTHVDAHAVTHVD---AHADTHVDAHADTHATRYKHACRRTCGHATYMHVDTIQSRMQTH 102
Query: 66 IVVAHLELC 40
+ + C
Sbjct: 103 MQTCYRHAC 111
>SB_10531| Best HMM Match : SET (HMM E-Value=0)
Length = 287
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 23 PQHKHTQSSRCATTMLLRL*STMAPAC 103
PQ+KH ++++C T + L + P C
Sbjct: 96 PQYKHIKTNKCTTAQRIILDPSEMPVC 122
>SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 167 GRPTMDGKTARGASS 123
GRP +DGK ARG +S
Sbjct: 277 GRPLLDGKEARGKAS 291
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 22.6 bits (46), Expect(2) = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 171 PPGRDGRYGPERLLRG*RGP 230
PPGRDG GP +G +GP
Sbjct: 1864 PPGRDGIPGPPG-RQGGKGP 1882
Score = 21.0 bits (42), Expect(2) = 9.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 165 PSPPGRDGRYG 197
P PPG G YG
Sbjct: 1843 PGPPGPPGAYG 1853
>SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 216 HVGVFLAHTDHHALVARATHDGREDGAGRVVAGE 115
H+GV L D+ +++R H G D G + G+
Sbjct: 152 HLGVTLKVEDNQLIISRIIHGGMIDRQGLLHVGD 185
>SB_29236| Best HMM Match : TMS_TDE (HMM E-Value=0)
Length = 834
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 17 QRPQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVW 196
Q P+ K S ++ L ++ ACA V P S SWV LA ++ SV+
Sbjct: 232 QTPEQKDAHSYSWPLAQVVLLTASFY-ACATFVRPDQIDKRSSQPISWVFLAVKSITSVF 290
Query: 197 ARKTPTWV 220
W+
Sbjct: 291 TAVVYLWI 298
>SB_3357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 61 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 174
D LVVD G G+ GD R + SI+ P++
Sbjct: 292 DQGGGLVVDQGGGLVVVQGEGDKKRRDIVQSILHVPKY 329
>SB_52201| Best HMM Match : DUF1557 (HMM E-Value=7.1)
Length = 303
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 107 RPVSPATTRPAPSSRPSWVALAT 175
R VS ATT P+++ WVA+ T
Sbjct: 17 RRVSIATTARVPAAQSEWVAMET 39
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,401,281
Number of Sequences: 59808
Number of extensions: 239195
Number of successful extensions: 815
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 387973711
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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