Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31295
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       30   0.023
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.0  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 423 DDEDERYFLYQTHNGQYRKERRLKDGSVVGTTGWVG-ADGFLRLQDYIAD 569
           D++   Y +   +  +YR E R  DG +VG  G V   DG LR   Y AD
Sbjct: 189 DNQKVGYVVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -2

Query: 258 KTYYFLILFTDFCF*SYRK*N*HSFCKQTKYIHTMLKRIVTMETSCVLNTSI 103
           K  Y +ILF DF +         +  K+ K +  + KR++  +T C  N+++
Sbjct: 75  KNTYLIILFADFAY--LETTWICTLLKKDKLLE-LFKRLIHFDTKCQENSTV 123


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -2

Query: 258 KTYYFLILFTDFCF*SYRK*N*HSFCKQTKYIHTMLKRIVTMETSCVLNTSI 103
           K  Y +ILF DF +         +  K+ K +  + KR++  +T C  N+++
Sbjct: 93  KNTYLIILFADFAY--LETTWICTLLKKDKLLE-LFKRLIHFDTKCQENSTV 141


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 174 FVYKRSVSSTFYNFKNKSR*IKLKNNR 254
           F +KR+ + TF    N  R    +NNR
Sbjct: 372 FYFKRARNGTFSTTANSCRSSTFRNNR 398


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/26 (26%), Positives = 18/26 (69%)
 Frame = -3

Query: 632 TYRSVLSNIYSFGFVYSITLVVSYVI 555
           T  ++++++ S  ++  ITL+V+Y +
Sbjct: 159 TESNIINDMCSLYYILQITLIVNYAL 184


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 95  IGKSFKY*ETKLRVRDRIECKIF 27
           +   F+Y + KL+ RD+ E  +F
Sbjct: 108 LNNKFQYIDEKLKTRDQKERNLF 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,187
Number of Sequences: 336
Number of extensions: 4392
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)