Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31290
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    26   0.30 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.70 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   3.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.6  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 240 KDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATA 419
           KD  E++LQ++       +  LGD + K   +  Q+ + +ER  +E  + +P V   + A
Sbjct: 16  KDVQETILQEM-------RDVLGDIHAKPTYSDLQNLKYLERCIKESLRLYPSVHLISRA 68

Query: 420 LREKLQ 437
           L E ++
Sbjct: 69  LGEDVR 74


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 226 KSCASFDLVSELNCCSKVLWNSLGVVFDVLEEVGSVASH 110
           KS A+FD V+  +    +LW S     DV+E+  S A +
Sbjct: 418 KSLAAFDFVARNSDTPIILWTSHLTQADVIEKYLSKARY 456


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/52 (19%), Positives = 26/52 (50%)
 Frame = +3

Query: 393 PDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYD 548
           PD ++    L + L++      ++ +++ KKV   +    +++  ++ A YD
Sbjct: 53  PDADELKRVLPDALKSDCAKCSEKQKEMTKKVIHFLSHNKQQMWKELTAKYD 104


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 381  GAPRPCARCSASTVPKPPWPCRSRLRALPG 292
            G P+P + CS +     P  C   L  L G
Sbjct: 1271 GGPQPYSACSENAFAAYPGDCTRYLHCLWG 1300



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 534  KAAYDDFAKNTHEVIK 581
            K+A+ DF K  HE  K
Sbjct: 1962 KSAFADFVKELHEAFK 1977



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 168  GTPLVWCSMSLKKSGASRRTIAPLGQSDAGEENYELG 58
            G P+   S SL  +  +    A  G  +AGEE    G
Sbjct: 2064 GMPMYGQSFSLADNNQNGLNAATYGGGEAGEETRARG 2100


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 113 RRDAPDFFKDIEH 151
           RR AP  F+DI+H
Sbjct: 84  RRKAPQSFEDIQH 96


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 217 ASFDLVSELNCCSKVLWNSL 158
           A  D  SE++C S+ +W+ L
Sbjct: 102 ALLDTGSEVSCISEEVWSKL 121


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 285 KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 434
           + +   LGD   K      Q  + +ER  +E+ + +P V   +  L E L
Sbjct: 340 EEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRLYPSVHFISRKLGEDL 389


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 285 KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 434
           + +   LGD   K      Q  + +ER  +E+ + +P V   +  L E L
Sbjct: 340 EEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRLYPSVHFISRKLGEDL 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,005
Number of Sequences: 336
Number of extensions: 1962
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)