Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31290
         (638 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               24   1.4  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   5.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   5.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.6  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 336 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES-QKLAKKVSSNVQETN 512
           +EQ  QN++   +     H  ++KNA    +K    +  ++Q+S +KL  K  S   E  
Sbjct: 48  MEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPRSMQDSTKKLFNKCKSIQNEDP 107

Query: 513 EKLAPKIKAAYDDF 554
            + A ++   Y +F
Sbjct: 108 CEKAYQLVKCYVEF 121


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/20 (40%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = +3

Query: 546 DDFAKNTHEVIKK-IQEAAN 602
           DDF ++ HE+I++ + +AA+
Sbjct: 86  DDFTEDVHEIIEQCVSKAAD 105


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/20 (40%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = +3

Query: 546 DDFAKNTHEVIKK-IQEAAN 602
           DDF ++ HE+I++ + +AA+
Sbjct: 86  DDFTEDVHEIIEQCVSKAAD 105


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 184 CSKVLWNSLGVVFDVLEEVGSVASH 110
           C K+ W S    FD+L  + S   H
Sbjct: 216 CMKLGWKSARTRFDILPLILSANGH 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,768
Number of Sequences: 438
Number of extensions: 2313
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)