Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31288
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   1.6  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   3.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   4.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.5  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 110 DDQAFVFHYAMQTQAGKDAMDELNKYRPGA 199
           D   FV  Y +  +AG+   D ++K  PGA
Sbjct: 607 DHSVFVQSYYLDREAGRTPGDAVHKIYPGA 636


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 301  SFVVASLRRLDGFATLQWAANESKIKSSY 387
            SFV+A  + LDG   + W  N+  +  S+
Sbjct: 1079 SFVMAE-KYLDGIPVMNWLVNQRYVTGSF 1106


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 170 DELNKYRPGANNTTGHRRQE 229
           DE   YRPGA   +G ++Q+
Sbjct: 465 DENFSYRPGAKPNSGQQQQQ 484


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 119 LGRLLKQIPDFGIFRVSFSRQFLE 48
           L R LK IPD  +  +S+ +Q+LE
Sbjct: 303 LRRELKSIPDPTVGPLSYLKQYLE 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,306
Number of Sequences: 2352
Number of extensions: 9974
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)