Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31288
         (544 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126401-1|AAI26402.1|  445|Homo sapiens spermidine/spermine N1-...    30   6.0  
Z99571-1|CAI42723.1|  445|Homo sapiens spermidine/spermine N1-ac...    29   8.0  
BC043215-1|AAH43215.2|  445|Homo sapiens spermidine/spermine N1-...    29   8.0  

>BC126401-1|AAI26402.1|  445|Homo sapiens spermidine/spermine
           N1-acetyl transferase-like 1 protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +2

Query: 143 QTQAGKDAMDELNKYRPGANNTTGHRRQEVLINAKDLNLPGPAYGGSWENGKLVLS-WPV 319
           Q  A    M++++  +P  +   G R+     N  D+N PG    G+W+ G+     WP 
Sbjct: 91  QRSASLYEMNQVDMKQPSMSQA-GMRQSGT--NLPDINQPGMKQPGTWQLGRSQPGMWPQ 147

Query: 320 SDVLMVLQHYNGQQTNPKSRVHIQT 394
           S   +VL   +  Q  P  R   Q+
Sbjct: 148 SLSELVLSEASISQPGPPQRAPSQS 172


>Z99571-1|CAI42723.1|  445|Homo sapiens spermidine/spermine
           N1-acetyl transferase-like 1 protein.
          Length = 445

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +2

Query: 239 NAKDLNLPGPAYGGSWENGKLVLS-WPVSDVLMVLQHYNGQQTNPKSRVHIQT 394
           N  D+N PG    G+W+ G+     WP S   +VL   +  Q  P  R   Q+
Sbjct: 120 NLPDINQPGMKQPGTWQLGRSQPGMWPQSLSELVLSEASISQPGPPQRAPSQS 172


>BC043215-1|AAH43215.2|  445|Homo sapiens spermidine/spermine
           N1-acetyl transferase-like 1 protein.
          Length = 445

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +2

Query: 239 NAKDLNLPGPAYGGSWENGKLVLS-WPVSDVLMVLQHYNGQQTNPKSRVHIQT 394
           N  D+N PG    G+W+ G+     WP S   +VL   +  Q  P  R   Q+
Sbjct: 120 NLPDINQPGMKQPGTWQLGRSQPGMWPQSLSELVLSEASISQPGPPQRAPSQS 172


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,226,754
Number of Sequences: 237096
Number of extensions: 1425318
Number of successful extensions: 2774
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2774
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)