Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31287
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 34 0.39
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 34 0.39
L19606-1|AAA03539.1| 450|Homo sapiens paired box homeotic prote... 31 2.8
BC001060-1|AAH01060.1| 450|Homo sapiens paired box gene 8 protein. 31 2.8
AC016683-2|AAX88880.1| 450|Homo sapiens unknown protein. 31 2.8
Y00839-2|CAA68764.1| 749|Homo sapiens 70 kD alpha-glucosidase p... 31 3.6
Y00839-1|CAA68763.1| 952|Homo sapiens glucan 1, 4-alpha-glucosi... 31 3.6
X55080-1|CAC12967.1| 952|Homo sapiens acid alpha-glucosidase pr... 31 3.6
M34424-1|AAA52506.1| 952|Homo sapiens GAA protein. 31 3.6
DQ907243-1|ABI53718.1| 952|Homo sapiens alpha-glucosidase protein. 31 3.6
BC040431-1|AAH40431.1| 952|Homo sapiens glucosidase, alpha; aci... 31 3.6
BC047411-1|AAH47411.1| 592|Homo sapiens tubulin tyrosine ligase... 31 4.8
BC031288-1|AAH31288.1| 265|Homo sapiens similar to hypothetical... 31 4.8
BC030650-1|AAH30650.1| 592|Homo sapiens TTLL2 protein protein. 31 4.8
AY026506-1|AAK20169.1| 592|Homo sapiens testis specific protein... 31 4.8
AL021331-3|CAD92564.1| 592|Homo sapiens RP3-366N23.3 protein. 31 4.8
BC036099-1|AAH36099.1| 716|Homo sapiens ARNT2 protein protein. 30 6.4
AK096229-1|BAC04732.1| 454|Homo sapiens protein ( Homo sapiens ... 30 6.4
AF185610-1|AAG15310.1| 706|Homo sapiens aryl-hydrocarbon recept... 30 6.4
AB002305-1|BAA20766.2| 716|Homo sapiens KIAA0307 protein. 30 6.4
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 34.3 bits (75), Expect = 0.39
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 331 PRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 483
PR+ GG P P + S+S TSP P S NY Y PT + PTSP
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 382 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 483
S+S TSP P S NY Y PT + PTSP
Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 382 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 483
S+S TSP P S NY Y PT + PTSP
Sbjct: 1761 SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 382 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 483
S+S TSP P S NY Y PT + PTSP
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 34.3 bits (75), Expect = 0.39
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 331 PRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 483
PR+ GG P P + S+S TSP P S NY Y PT + PTSP
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 382 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 483
S+S TSP P S NY Y PT + PTSP
Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 382 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 483
S+S TSP P S NY Y PT + PTSP
Sbjct: 1761 SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 382 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 483
S+S TSP P S NY Y PT + PTSP
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
>L19606-1|AAA03539.1| 450|Homo sapiens paired box homeotic protein
protein.
Length = 450
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 265 PDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 444
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 445 GYQP 456
G+ P
Sbjct: 406 GHTP 409
>BC001060-1|AAH01060.1| 450|Homo sapiens paired box gene 8 protein.
Length = 450
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 265 PDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 444
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 445 GYQP 456
G+ P
Sbjct: 406 GHTP 409
>AC016683-2|AAX88880.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 265 PDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 444
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 445 GYQP 456
G+ P
Sbjct: 406 GHTP 409
>Y00839-2|CAA68764.1| 749|Homo sapiens 70 kD alpha-glucosidase
protein.
Length = 749
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 244 KFGNEINPDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGS 384
+F +++ DG + E ++ I E G P N NPP VP V G+
Sbjct: 302 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 348
>Y00839-1|CAA68763.1| 952|Homo sapiens glucan 1,
4-alpha-glucosidase protein.
Length = 952
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 244 KFGNEINPDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGS 384
+F +++ DG + E ++ I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>X55080-1|CAC12967.1| 952|Homo sapiens acid alpha-glucosidase
protein.
Length = 952
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 244 KFGNEINPDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGS 384
+F +++ DG + E ++ I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>M34424-1|AAA52506.1| 952|Homo sapiens GAA protein.
Length = 952
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 244 KFGNEINPDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGS 384
+F +++ DG + E ++ I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>DQ907243-1|ABI53718.1| 952|Homo sapiens alpha-glucosidase protein.
Length = 952
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 244 KFGNEINPDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGS 384
+F +++ DG + E ++ I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>BC040431-1|AAH40431.1| 952|Homo sapiens glucosidase, alpha; acid
(Pompe disease, glycogen storage disease type II)
protein.
Length = 952
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 244 KFGNEINPDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQGS 384
+F +++ DG + E ++ I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>BC047411-1|AAH47411.1| 592|Homo sapiens tubulin tyrosine
ligase-like family, member 2 protein.
Length = 592
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 323 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 466
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>BC031288-1|AAH31288.1| 265|Homo sapiens similar to hypothetical
protein MGC49416 protein.
Length = 265
Score = 30.7 bits (66), Expect = 4.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 220 EGYGAETVKFGNEINPDGSYTYFYETNHGIAAQEQGVPRNLGGNPPAVPVVAQG 381
+GY AE G+ + DGS T G A+ + PR GG A+ A+G
Sbjct: 26 QGY-AEPEGVGDAVRADGSVTLVLPQTRGPASSHRESPRGSGGAEAALEEAARG 78
>BC030650-1|AAH30650.1| 592|Homo sapiens TTLL2 protein protein.
Length = 592
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 323 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 466
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>AY026506-1|AAK20169.1| 592|Homo sapiens testis specific protein
NYD-TSPG protein.
Length = 592
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 323 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 466
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>AL021331-3|CAD92564.1| 592|Homo sapiens RP3-366N23.3 protein.
Length = 592
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 323 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 466
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>BC036099-1|AAH36099.1| 716|Homo sapiens ARNT2 protein protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 355 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 483
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 582 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 624
>AK096229-1|BAC04732.1| 454|Homo sapiens protein ( Homo sapiens
cDNA FLJ38910 fis, clone NT2NE2006813, weakly similar to
CELL SURFACE GLYCOPROTEIN 1 PRECURSOR. ).
Length = 454
Score = 30.3 bits (65), Expect = 6.4
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 332 HVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPLPHQCLSRSLVL 511
H +LV L S H + H L + P S+ SP R SPL+ P P + L
Sbjct: 32 HYSLVSPHRLLMSPHYSPMSPHRLLMSPHYSLVSPHRLLMSPLLSGVPSPPSDVPSLLSG 91
Query: 512 LPTSP 526
+P+ P
Sbjct: 92 VPSLP 96
>AF185610-1|AAG15310.1| 706|Homo sapiens aryl-hydrocarbon receptor
nuclear translocator 2 protein.
Length = 706
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 355 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 483
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 571 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 613
>AB002305-1|BAA20766.2| 716|Homo sapiens KIAA0307 protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 355 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 483
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 581 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 623
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,390,802
Number of Sequences: 237096
Number of extensions: 2549745
Number of successful extensions: 12917
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12864
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -