Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31285
(336 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 24 0.43
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 23 1.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 3.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 3.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 3.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 3.0
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 3.0
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 3.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 3.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 3.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 4.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 4.0
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 5.3
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 20 7.0
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 20 7.0
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 20 9.2
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 9.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 20 9.2
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 24.2 bits (50), Expect = 0.43
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -3
Query: 256 MGSNITEAIEVDLPAVFRIVFIDECLKFVSHRTAVPLC---*EWWRSSARRC 110
M S + I++++P+V IVF + V T P+C WW C
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNC 173
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 22.6 bits (46), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 123 EDLHHSQHNGTAVR*LTNFKHSSMKTIRKTAGRSTSMA 236
E +HH HNG R + K ++ K G + +A
Sbjct: 20 ESVHHCHHNGVVHR---DLKPENLLLASKAKGAAVKLA 54
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 3.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 177 FKHSSMKTIRKTAGRSTSMASVILLPISLKRKTLNPCNKN*KKLSDY 317
++ +S + R R S I+ SL KT++ N N KKL Y
Sbjct: 59 YRETSKERSRDRKERERSKEPKIIS--SLSNKTIHNNNNNYKKLQYY 103
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 3.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 177 FKHSSMKTIRKTAGRSTSMASVILLPISLKRKTLNPCNKN*KKLSDY 317
++ +S + R R S I+ SL KT++ N N KKL Y
Sbjct: 59 YRETSKERSRDRKERERSKEPKIIS--SLSNKTIHNNNNNYKKLQYY 103
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 3.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 177 FKHSSMKTIRKTAGRSTSMASVILLPISLKRKTLNPCNKN*KKLSDY 317
++ +S + R R S I+ SL KT++ N N KKL Y
Sbjct: 59 YRETSKERSRDRKERERSKEPKIIS--SLSNKTIHNNNNNYKKLQYY 103
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 3.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 177 FKHSSMKTIRKTAGRSTSMASVILLPISLKRKTLNPCNKN*KKLSDY 317
++ +S + R R S I+ SL KT++ N N KKL Y
Sbjct: 59 YRETSKERSRDRKERERSKEPKIIS--SLSNKTIHNNNNNYKKLQYY 103
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 3.0
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 31 TW-YSDDEQKMAMLR-KAF-QMLDTTKSGYIDVLKISTILNT 147
+W ++ D+ +A+ K F + D KSG D++ + LNT
Sbjct: 171 SWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINVPAYLNT 212
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 3.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 230 DGFCNIASHFLEEEDAEPMQQELKEAFRLYDR 325
+G IA H EED+ ++++ K + DR
Sbjct: 484 EGIRFIADHTKREEDSTRVKEDWKYVAMVLDR 515
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 3.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 177 FKHSSMKTIRKTAGRSTSMASVILLPISLKRKTLNPCNKN*KKLSDY 317
++ +S + R R S I+ SL KT++ N N KKL Y
Sbjct: 292 YRETSKERSRDRKERERSKEPKIIS--SLSNKTIHNNNNNYKKLQYY 336
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 3.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 155 SCSMTHELQALIDENDPENSGKINFDGFCNIASHFLEEED 274
S S L +D ++P+N+GK D + + +L++ D
Sbjct: 1358 SLSEIDNLDVSLDVSNPKNAGKKKIDVRAKL-NEYLDKAD 1396
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 4.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 170 ESSNSCPIVLRMVEIFSTSM 111
E+++ IV +EIFSTSM
Sbjct: 394 EAASKYQIVPSALEIFSTSM 413
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 4.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 170 ESSNSCPIVLRMVEIFSTSM 111
E+++ IV +EIFSTSM
Sbjct: 394 EAASKYQIVPSALEIFSTSM 413
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 20.6 bits (41), Expect = 5.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 141 ENGGDLQHVDVTRLRGV 91
E GG++Q V ++ L+G+
Sbjct: 278 ELGGEIQCVKISALKGI 294
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 20.2 bits (40), Expect = 7.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 104 LVTSTC*RSPPFSTQWDSCSMTHELQ 181
LVT TC + ++T++D + LQ
Sbjct: 10 LVTITCVIAEDYTTKYDDMDIDRILQ 35
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 20.2 bits (40), Expect = 7.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 104 LVTSTC*RSPPFSTQWDSCSMTHELQ 181
LVT TC + ++T++D + LQ
Sbjct: 10 LVTITCVIAEDYTTKYDDMDIDRILQ 35
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 196 FIDECLKFVSHRTAVPL 146
F+ K V H T VPL
Sbjct: 364 FLPSIEKMVDHETMVPL 380
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 9.2
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 111 HRRAEDLHHSQHN 149
H R EDL H N
Sbjct: 231 HSRYEDLRHEDRN 243
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 19.8 bits (39), Expect = 9.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 3 CYSRQSLTCNM 35
C++R TCNM
Sbjct: 711 CHNRNVTTCNM 721
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,085
Number of Sequences: 438
Number of extensions: 1959
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7591023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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