Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31279
         (424 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0081 - 12716130-12716271,12716367-12716449,12716729-127167...    28   2.7  
05_03_0676 - 16853937-16854042,16854605-16854700,16854920-168550...    27   8.2  

>10_07_0081 -
           12716130-12716271,12716367-12716449,12716729-12716785,
           12716886-12716942,12717014-12717113,12717204-12717274,
           12718284-12718460,12719142-12719312,12722151-12722234,
           12722310-12722354,12722447-12722537,12722745-12722863,
           12723213-12723434,12723630-12723854,12725366-12725571,
           12726081-12726258,12726702-12726762,12727930-12728039,
           12728126-12728257,12729136-12729208,12729608-12729645,
           12730373-12730474,12730565-12730622,12731071-12731172,
           12731240-12731386,12732023-12732159,12732256-12732405,
           12733103-12733259,12733615-12733673,12733982-12734138,
           12734209-12734354,12739177-12739320,12739478-12739606
          Length = 1309

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 372 IHGFNCFLYFSFNYICYN 319
           I+GF CF Y SF  +C N
Sbjct: 433 IYGFECFKYNSFEQLCIN 450


>05_03_0676 -
           16853937-16854042,16854605-16854700,16854920-16855089,
           16856742-16856825,16857042-16857119,16858053-16858216,
           16858345-16858429
          Length = 260

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 365 GLTVFYTFRLIIYVIINDFNLIII 294
           G+ +FY FR I+Y+I   FN  II
Sbjct: 92  GIFMFYCFRRIVYIIFG-FNTCII 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,978,792
Number of Sequences: 37544
Number of extensions: 43180
Number of successful extensions: 107
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)