Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31279
         (424 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical pr...    30   0.59 
AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine re...    29   1.0  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    28   3.2  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    28   3.2  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    28   3.2  
Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical p...    27   4.2  
AL110477-1|CAB54325.1|  331|Caenorhabditis elegans Hypothetical ...    27   5.5  
Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z36752-2|CAA85324.1|  371|Caenorhabditis elegans Hypothetical pr...    26   9.7  

>Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical
           protein F57G9.1 protein.
          Length = 357

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -3

Query: 185 YIIYLPFNLKLMVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFL 42
           Y    P NLKL++    +L  IL   + N+ IY ++K+ L +    FL
Sbjct: 17  YFYNEPLNLKLVISIFELLSYILCGYILNLSIYVMSKIQLFHKNLMFL 64


>AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein100 protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 398 LIVFILFYLSTGLTVFYTFRLII 330
           L+  ILF+LS  L+VFY FR ++
Sbjct: 147 LMAVILFFLSALLSVFYQFRFVV 169


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 191  YPYIIYLPFNLKLMVIYVSILGSILGFMVRNMGIYSLN 78
            +P  +Y  F     ++   ++  ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 191  YPYIIYLPFNLKLMVIYVSILGSILGFMVRNMGIYSLN 78
            +P  +Y  F     ++   ++  ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 191  YPYIIYLPFNLKLMVIYVSILGSILGFMVRNMGIYSLN 78
            +P  +Y  F     ++   ++  ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical
           protein C01G10.3 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 398 LIVFILFYLSTGLTVFYTFRLIIYVIINDFNL-IIIYNLYDEDYIMLNRIF 249
           L+V I  Y+   L  F  +   +  II  F + +++YN +   Y+ +NR F
Sbjct: 71  LVVMIGVYVPESLIGFSIYPRSVESIIIIFGMNLLVYNEFQSVYLSINRFF 121


>AL110477-1|CAB54325.1|  331|Caenorhabditis elegans Hypothetical
           protein Y113G7B.2 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 410 NSFNLIVFILFYLSTGLTVFYTFRLIIYVIIN 315
           N   ++VFI  ++   +++F+  RL I+V+ N
Sbjct: 99  NQVYIVVFIGAFMLVAISIFFENRLFIFVLTN 130


>Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical
           protein K09A9.3 protein.
          Length = 450

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 395 IVFILFYLSTGLTVFYTFRLIIYVIINDFN 306
           ++FI    ST LT F+T  +I  +++N  N
Sbjct: 137 MIFIYVETSTWLTGFFTLTIITIIVLNGAN 166


>Z36752-2|CAA85324.1|  371|Caenorhabditis elegans Hypothetical
           protein F35H8.2 protein.
          Length = 371

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 386 ILFYLSTGLTVFYTFRLIIYVII---NDFNLIIIYNLYDEDYI 267
           +L  L   LT + T+   I+V I   N+ +  I++N   EDY+
Sbjct: 20  VLLILFIALTAYATYSFHIFVPIAPNNEIDCAIMFNKSSEDYL 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,147,262
Number of Sequences: 27780
Number of extensions: 53980
Number of successful extensions: 221
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)