Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31278
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.075
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.075
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.075
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.075
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.30 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.70 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.2  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   8.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.075
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 305 VPDLLHVIPVGDDTVLD 255
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.075
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 305 VPDLLHVIPVGDDTVLD 255
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.075
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 305 VPDLLHVIPVGDDTVLD 255
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.075
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 305 VPDLLHVIPVGDDTVLD 255
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 220  WASSPT*ESFWPIPTITPWWRGRPTMDGKTAR 125
            W + P+  ++W   T +PWW    T    T R
Sbjct: 1035 WTTKPS--TWWSSTTTSPWWTTTTTRRTTTTR 1064



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = -2

Query: 220  WASSPT*ESFWPIPTITPWWRGRPTMDGKTAR 125
            W SS T   +W   T       RPT    T R
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTR 1073


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 267 IITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 362
           ++T+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 511 EMVSPTPYPSTXVTLCPTPSXVWTWAGRDLTDYL 612
           E+V P P P   VT  P+ +       RDLT  L
Sbjct: 388 EIVEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTL 421


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 236 PHSEVPHRARYHHQ 277
           PH EVP    Y+H+
Sbjct: 16  PHQEVPPPFGYYHE 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,375
Number of Sequences: 336
Number of extensions: 2980
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)