Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31278
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 383 e-107
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 382 e-106
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 381 e-106
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 381 e-106
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 381 e-106
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 381 e-106
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 381 e-106
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 381 e-106
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 365 e-101
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 342 1e-94
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 288 3e-78
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 233 8e-62
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 190 7e-49
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 3e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 9e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 9e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 1e-46
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 148 3e-36
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 1e-27
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 57 9e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 57 9e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.52
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.52
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.6
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.4
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 6.4
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 8.5
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 8.5
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 8.5
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 8.5
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 8.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 383 bits (943), Expect = e-107
Identities = 177/181 (97%), Positives = 180/181 (99%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 401
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 402 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLD 581
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYE YALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 582 L 584
L
Sbjct: 181 L 181
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 182 AGRDLTDYLMKILTER 197
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 382 bits (939), Expect = e-106
Identities = 175/181 (96%), Positives = 180/181 (99%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 401
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 402 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLD 581
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYE YALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 582 L 584
L
Sbjct: 181 L 181
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 182 AGRDLTDYLMKILTER 197
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 381 bits (938), Expect = e-106
Identities = 175/181 (96%), Positives = 180/181 (99%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 401
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 402 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLD 581
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYE YALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 582 L 584
L
Sbjct: 181 L 181
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 182 AGRDLTDYLMKILTER 197
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 381 bits (938), Expect = e-106
Identities = 175/181 (96%), Positives = 180/181 (99%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 401
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 402 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLD 581
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYE YALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 582 L 584
L
Sbjct: 181 L 181
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 182 AGRDLTDYLMKILTER 197
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 381 bits (938), Expect = e-106
Identities = 175/181 (96%), Positives = 180/181 (99%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 401
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 402 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLD 581
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYE YALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 582 L 584
L
Sbjct: 181 L 181
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 182 AGRDLTDYLMKILTER 197
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 381 bits (938), Expect = e-106
Identities = 175/181 (96%), Positives = 180/181 (99%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 401
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 402 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLD 581
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYE YALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 582 L 584
L
Sbjct: 181 L 181
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 182 AGRDLTDYLMKILTER 197
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 381 bits (938), Expect = e-106
Identities = 175/181 (96%), Positives = 180/181 (99%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 401
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 402 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLD 581
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYE YALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 582 L 584
L
Sbjct: 181 L 181
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 182 AGRDLTDYLMKILTER 197
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 381 bits (938), Expect = e-106
Identities = 175/181 (96%), Positives = 180/181 (99%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 401
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 402 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLD 581
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYE YALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 582 L 584
L
Sbjct: 181 L 181
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 182 AGRDLTDYLMKILTER 197
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 365 bits (897), Expect = e-101
Identities = 166/179 (92%), Positives = 176/179 (98%)
Frame = +3
Query: 48 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 227
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 228 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 407
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 408 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLDL 584
IMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYE YALPHAI RLDL
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDY+MKILTER
Sbjct: 181 AGRDLTDYMMKILTER 196
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 342 bits (841), Expect = 1e-94
Identities = 157/163 (96%), Positives = 162/163 (99%)
Frame = +3
Query: 96 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 275
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 276 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 455
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 456 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLDL 584
AVLSLYASGRTTG+VLDSGDGV+HTVPIYE YALPHAILRLDL
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 167
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 168 AGRDLTDYLMKILTER 183
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 288 bits (706), Expect = 3e-78
Identities = 132/137 (96%), Positives = 136/137 (99%)
Frame = +3
Query: 174 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 353
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 354 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 533
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 534 PIYEXYALPHAILRLDL 584
PIYE YALPHAILRLDL
Sbjct: 121 PIYEGYALPHAILRLDL 137
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 AGRDLTDYLMKILTER 633
AGRDLTDYLMKILTER
Sbjct: 138 AGRDLTDYLMKILTER 153
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 233 bits (570), Expect = 8e-62
Identities = 105/183 (57%), Positives = 141/183 (77%), Gaps = 4/183 (2%)
Frame = +3
Query: 48 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 218
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 219 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 395
+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 396 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILR 575
+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI + +A+ HAI R
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQR 181
Query: 576 LDL 584
+DL
Sbjct: 182 MDL 184
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 190 bits (463), Expect = 7e-49
Identities = 91/176 (51%), Positives = 123/176 (69%), Gaps = 3/176 (1%)
Frame = +3
Query: 66 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 239
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 240 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 416
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 417 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLDL 584
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YE +AL H RLD+
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDI 184
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 188 bits (458), Expect = 3e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKI 299
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 9e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKI 299
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 9e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDMEKI 299
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 182 bits (444), Expect = 1e-46
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 221
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 222 SKRGILTLKYPIEHGIITNWDDM 290
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 148 bits (359), Expect = 3e-36
Identities = 81/202 (40%), Positives = 113/202 (55%), Gaps = 21/202 (10%)
Frame = +3
Query: 42 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 185
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 186 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 362
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 363 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDG 518
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 519 VSHTVPIYEXYALPHAILRLDL 584
V+H +P+ + Y + I + +
Sbjct: 181 VTHCIPVADGYVIGSCIKHIPI 202
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (288), Expect = 1e-27
Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 17/196 (8%)
Frame = +3
Query: 51 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 224
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 225 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 359
KR G + P ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 360 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 539
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPV 188
Query: 540 YEXYALPHAILRLDLG 587
++ YA+ HA+++ +G
Sbjct: 189 FDGYAVTHAVVKCPIG 204
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 57.2 bits (132), Expect = 9e-09
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Frame = +3
Query: 57 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 236
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 237 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 416
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 417 ETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEXYALPHAILRLDL 584
+ F ++ + L S + +V+DSG + + +++R+D+
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175
Query: 585 GWSRL 599
G L
Sbjct: 176 GGKAL 180
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 57.2 bits (132), Expect = 9e-09
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Frame = +3
Query: 57 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 236
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 237 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 416
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 417 ETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEXYALPHAILRLDL 584
+ F ++ + L S + +V+DSG + + +++R+D+
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175
Query: 585 GWSRL 599
G L
Sbjct: 176 GGKAL 180
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 49.6 bits (113), Expect = 2e-06
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Frame = +3
Query: 66 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 239
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 240 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 419
+E I D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 420 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEXYALPHAILRLDLG 587
+ + Q L LYA TTG+V+D G+ V + VP+ + Y + AI + G
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYG 353
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 520 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 425
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 73 STMAPACARPVSPATTRPAPSSRP 144
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.52
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 207 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 386
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 387 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 539
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 64 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 171
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 187 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 77
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 96 KAGFAGDDAPRAVFPSIVGRPRHQG 170
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 73 STMAPACARPVSPATTRPAPSSRPSWVALATRA 171
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 237 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 154
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 237 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 154
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 237 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 154
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 237 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 154
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 237 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 154
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,911,659
Number of Sequences: 27780
Number of extensions: 298446
Number of successful extensions: 1379
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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