Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31277
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...   134   2e-30
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...   130   3e-29
UniRef50_A0YX86 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_A7S562 Cluster: Predicted protein; n=1; Nematostella ve...    34   2.7  
UniRef50_Q3MPM6 Cluster: Putative uncharacterized protein CaJ7.0...    34   2.7  
UniRef50_UPI00005A4201 Cluster: PREDICTED: hypothetical protein ...    34   3.6  
UniRef50_A2DYY2 Cluster: ATP-dependent DNA helicase, RecQ family...    33   4.7  
UniRef50_Q9LIR5 Cluster: Genomic DNA, chromosome 3, BAC clone:F1...    33   6.2  
UniRef50_UPI0000E481C4 Cluster: PREDICTED: similar to KIAA1604 p...    33   8.2  

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score =  134 bits (324), Expect = 2e-30
 Identities = 71/126 (56%), Positives = 75/126 (59%)
 Frame = +2

Query: 179 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSX 358
           P    EGEGDPEFIKRQDQKRSDLD+QLKEYI EWRKQR+            QAKRKV+ 
Sbjct: 26  PQTPAEGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVTR 85

Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPN 538
                                       +IEEKR RLEEAEKKRQAMLQAMKD  K GPN
Sbjct: 86  AEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPN 145

Query: 539 FTIPKK 556
           FTI KK
Sbjct: 146 FTIAKK 151



 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +3

Query: 573 LSNAQLERNKTKEQLEEEKKISLSIPIKPL 662
           LS+A +ERNKTKEQLEEEKKISLS  IKPL
Sbjct: 158 LSSAAMERNKTKEQLEEEKKISLSFRIKPL 187


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score =  130 bits (314), Expect = 3e-29
 Identities = 69/123 (56%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
 Frame = +2

Query: 191 QEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXX 370
           +EG GDPEFIKRQDQKRSDLDEQL+EYI EWRKQRA            QAKRK+S     
Sbjct: 31  EEGAGDPEFIKRQDQKRSDLDEQLREYITEWRKQRAKEEDELKKLKEKQAKRKISRAEEE 90

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKT-GPNFTI 547
                                   DIEEKRQRLEEAEKKRQAM+QA+KD +K  GPNFTI
Sbjct: 91  RKMAERKKQEEERRIREIEEKKQRDIEEKRQRLEEAEKKRQAMMQALKDQNKNKGPNFTI 150

Query: 548 PKK 556
            K+
Sbjct: 151 TKR 153



 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 31/43 (72%), Positives = 33/43 (76%)
 Frame = +3

Query: 534 PTSPSQRRAKTSVLSNAQLERNKTKEQLEEEKKISLSIPIKPL 662
           P     +R  +S LS AQLERNKTKEQLEEEKKISLSI IKPL
Sbjct: 146 PNFTITKRDASSNLSAAQLERNKTKEQLEEEKKISLSIRIKPL 188


>UniRef50_A0YX86 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 165

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 519 PARPDPTSPSQRRAKTSVLSNAQLE---RNKTKEQLEEEKKISLSIPIKP 659
           P RP P    Q  AKT V +++Q E    +K + Q E + +  LS+P KP
Sbjct: 13  PNRPKPDDIKQSEAKTDVQTDSQKESKTESKPESQTESKTESKLSLPEKP 62


>UniRef50_A7S562 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 423

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 15/25 (60%), Positives = 21/25 (84%)
 Frame = +2

Query: 446 IEEKRQRLEEAEKKRQAMLQAMKDA 520
           +EE+R+RLE  EK+RQA  QAM++A
Sbjct: 140 LEEERKRLENLEKERQAAQQAMQEA 164


>UniRef50_Q3MPM6 Cluster: Putative uncharacterized protein
           CaJ7.0126; n=2; Candida albicans|Rep: Putative
           uncharacterized protein CaJ7.0126 - Candida albicans
           (Yeast)
          Length = 1094

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 513 KMPARPDPTSPSQRRAKTSVLSNAQLERNKTKEQLEEEK 629
           K   R D     +R+AK +    AQ E+ K KEQ EEEK
Sbjct: 559 KGSTRKDRVKEEKRKAKEAAKEQAQEEKRKAKEQAEEEK 597


>UniRef50_UPI00005A4201 Cluster: PREDICTED: hypothetical protein
           XP_854712; n=1; Canis lupus familiaris|Rep: PREDICTED:
           hypothetical protein XP_854712 - Canis familiaris
          Length = 92

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -1

Query: 648 EWTGRFSSPLPAAPWSCCAPA 586
           E+TGR ++P  AAP  CCAPA
Sbjct: 66  EYTGRATTPTTAAPCECCAPA 86


>UniRef50_A2DYY2 Cluster: ATP-dependent DNA helicase, RecQ family
            protein; n=1; Trichomonas vaginalis G3|Rep: ATP-dependent
            DNA helicase, RecQ family protein - Trichomonas vaginalis
            G3
          Length = 1447

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 513  KMPARPDPTSPSQRRAKTSVLSNAQLERNKTKEQLEEEKKISLSIP 650
            ++P  P P   + R+ +     NAQ E   T++Q +++  +SL +P
Sbjct: 998  QIPPPPPPVQQTPRKTRGRKKKNAQSETQATEDQTQQQSSVSLPLP 1043


>UniRef50_Q9LIR5 Cluster: Genomic DNA, chromosome 3, BAC
           clone:F14O13; n=2; Arabidopsis thaliana|Rep: Genomic
           DNA, chromosome 3, BAC clone:F14O13 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 224

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 176 KPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 295
           K   K +  G    IK +D++   +  QLKE   EWRK+R
Sbjct: 17  KETSKDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKER 56


>UniRef50_UPI0000E481C4 Cluster: PREDICTED: similar to KIAA1604
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to KIAA1604 protein -
           Strongylocentrotus purpuratus
          Length = 1002

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +3

Query: 540 SPSQRRAKTSVLSNAQLERNKTKEQLEEEKKISLS 644
           SPS RR  T   S+ + ER + K+++EE+K  SLS
Sbjct: 47  SPSPRRRSTRRQSSGENERRRDKQEVEEKKDRSLS 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,873,958
Number of Sequences: 1657284
Number of extensions: 7494355
Number of successful extensions: 32619
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32574
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)