Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31277
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   4.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   6.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.1  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 293 AVCAIR*CIPSTVHP 249
           A C I  C P TVHP
Sbjct: 357 AFCNIVSCSPQTVHP 371


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 479 EKKRQAMLQAMKDASKTG 532
           EKKRQA L  + +A + G
Sbjct: 313 EKKRQAFLDLLIEAGQNG 330


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 446 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIPKKSENFG 571
           I  + +R++  EK    +L  + +AS   PN  +     NFG
Sbjct: 327 INTRGERIQLTEKNGIDVLGNIMEASILSPNQNVYGDLHNFG 368


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 636 RFSSPLPAAPW 604
           RF  PLP  PW
Sbjct: 76  RFRKPLPIEPW 86


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 636 RFSSPLPAAPW 604
           RF  PLP  PW
Sbjct: 76  RFRKPLPIEPW 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,058
Number of Sequences: 438
Number of extensions: 2231
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)